New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	744925 =	NA (NA)	7 (0.440)	4/262	0.8	77.9%	intergenic (‑587/+44)	PP_0636/PP_0637	cold shock DNA‑binding domain‑containing protein/transposase
	?	NC_002947	2559164 =	2 (0.130)					coding (153/1881 nt)	PP_2240	ABC transporter permease/ATP‑binding protein

TGACAATGCCACTTAGAATTTACATTCTGGAAGCAAGGCAGGCAATGCTGATTGATCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGAT  >  NC_002947/744800‑745029                                                                                                                              |                                                                                                         tgaCAATGCCACTTAGAATTTACATTCTGGAAGCAAGGCAGGCAATGCTGATTGATCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCa                                                                                                >  1:282221/1‑136 (MQ=255)                                                      gatCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCg                                           >  2:147095/1‑136 (MQ=255)                                                                                               ggAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGAt  <  2:255927/136‑1 (MQ=255)                                                                                                                              |                                                                                                         TGACAATGCCACTTAGAATTTACATTCTGGAAGCAAGGCAGGCAATGCTGATTGATCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGAT  >  NC_002947/744800‑745029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.