Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4986194	4986251	58	2 [0]	[1] 2	flgE	flagellar hook protein FlgE

CACACCGTCCGCGTTGGCGATGGCGCCATTGGCCGACCACTCTCCAGCGGCGTTTTTCTGCGCCGGGATCCAGTCGTTGAGCTGGAAGATCTTGTCTTCGCCAATGCTCAGGCCGCCCGCGACGTCACCCGCAGTC  >  NC_002947/4986058‑4986193                                                                                                                                        | cacaCCGTCCGCGTTGGCGATGGCGCCATTGGCCGACCACTCTCCAGCGGCGTTTTTCTGCGCCGGGATCCAGTCGTTGAGCTGGAAGATCTTGTCTTCGCCAAAGCTCAGGCCGCCCGCGACGTCACCCGCAGTc  >  1:265598/1‑136 (MQ=255) cacaCCGTCCGCGTTGGCGATGGCGCCATTGGCCGACCACTCTCCAGCGGCGTTTTTCTGCGCCGGGATCCAGTCGTTGAGCTGGAAGATCATGTCTTCGCCAATGCAAACGCCGCCCCCCACCTCACCCGCAGTc  >  2:363885/1‑136 (MQ=255)                                                                                                                                        | CACACCGTCCGCGTTGGCGATGGCGCCATTGGCCGACCACTCTCCAGCGGCGTTTTTCTGCGCCGGGATCCAGTCGTTGAGCTGGAAGATCTTGTCTTCGCCAATGCTCAGGCCGCCCGCGACGTCACCCGCAGTC  >  NC_002947/4986058‑4986193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑