Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3377771	3377813	43	2 [1]	[0] 3	PP_2970/PP_2971	hypothetical protein/transposase

GATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACT  >  NC_002947/3377814‑3377949 |                                                                                                                                        gATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGtt                                  <  1:291904/104‑1 (MQ=255) gATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGtt                                  >  2:291904/1‑104 (MQ=255) gATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACt  >  1:40694/1‑136 (MQ=255) |                                                                                                                                        GATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACT  >  NC_002947/3377814‑3377949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑