Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 3781353 3781407 55 2 [0] [1] 3 PP_3338/PP_3339 cytochrome bd‑type quinol oxidase/hypothetical protein

CTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAG  >  NC_002947/3781262‑3781352
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cTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAg  >  1:43904/1‑91 (MQ=255)
cTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAg  <  2:43904/91‑1 (MQ=255)
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CTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAG  >  NC_002947/3781262‑3781352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: