Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2227622	2227652	31	2 [1]	[1] 3	PP_1962	site‑specific recombinase

TGTGCGCGTTATCGTGCAAATTGAGTAAGTGGCGTTTGTGTGCATCGATTTTTGCCTGTATTTTCCGGCGCGCCTTGGCGGATACGCTGTCGTCCGCGTTTTCAAGCAGCTGTTCGTAGAAGTGGATGTTGTCCTTCATGG  >  NC_002947/2227648‑2227788      |                                                                                                                                        tgtgCGCGTTATCGTGCAAATTGAGTAAGTGGCGTTTGTGTGCATCGATTTTTGCCTGTATTTTCCGGCGCGCCTTGGCGGATACGCTGTCGTCCGCGTTTTCAAGCAGCTGTTCGTAGAAGTGGATGTTGTCCtt       >  1:281104/1‑136 (MQ=255)    gagcgTTATCGTGCAAATTGAGTAAGTGGAGTTTGTGTGCATCGATTTTTGCCTGTATTTTCCGGCGCGCCATGGCGGATACGCTGTCGTCCGCGTATTCAAGCAGCTCTTCGTAGAAGTGGATGTTGTCCTTCAt    >  2:109441/3‑136 (MQ=255)      gcgTTATCGTGCAAATTGAGTAAGTGGCGTTTGTGTGCATCGATTTTTGCCTGTATTTTCCGGCGCGCCTTGGCGGATACGCTGTCGTCCGCGTTTTCAAGCAGCTGTTCGTAGAAGTGGATGTTGTCCTTCATgg  >  2:89338/1‑136 (MQ=255)      |                                                                                                                                        TGTGCGCGTTATCGTGCAAATTGAGTAAGTGGCGTTTGTGTGCATCGATTTTTGCCTGTATTTTCCGGCGCGCCTTGGCGGATACGCTGTCGTCCGCGTTTTCAAGCAGCTGTTCGTAGAAGTGGATGTTGTCCTTCATGG  >  NC_002947/2227648‑2227788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑