| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,168,578 | C→A | 100% | intergenic (+47/‑71) | oprB‑I → / → yeaD | carbohydrate‑selective porin/glucose‑6‑phosphate 1‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,168,578 | 0 | C | A | 100.0% | 60.4 / ‑6.8 | 20 | intergenic (+47/‑71) | oprB‑I/yeaD | carbohydrate‑selective porin/glucose‑6‑phosphate 1‑epimerase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (5/14); minor base T (0/1); total (5/15) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TACATCAAGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCACCCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGCGGCCCCGGCCGAC > NC_002947/1168454‑1168701 | tACATCAAGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTg < 1:88641/136‑1 (MQ=255) aCATCAAGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAATATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTATCTGTTCCCGGCAACCACTGGTCTGc < 2:349515/136‑1 (MQ=255) aCATCAAGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGc < 1:194397/136‑1 (MQ=255) aTCAAGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAg < 1:141831/136‑1 (MQ=255) aaGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTgg > 1:246894/1‑136 (MQ=255) ggggTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGATGGGGATa > 2:227290/1‑136 (MQ=255) aGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACa < 1:393562/136‑1 (MQ=255) aGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACa < 1:371716/136‑1 (MQ=255) aGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACa < 1:23194/136‑1 (MQ=255) ggTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCATCCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAaacaa < 1:418512/136‑1 (MQ=255) ggTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCTGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAaacaa < 2:198820/136‑1 (MQ=255) ggTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAaacaa < 2:330447/136‑1 (MQ=255) tCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAacaaca < 2:246894/136‑1 (MQ=255) tCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAacaaca > 1:117355/1‑136 (MQ=255) aGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAAc > 2:246648/1‑136 (MQ=255) gCCAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGc < 1:246648/136‑1 (MQ=255) cAATCCATTTTCGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGCgg < 2:374941/136‑1 (MQ=255) ccATTTTCGGTTCCCGGCAACCACTGGTCTGCTGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGCGGcccc < 1:139954/136‑1 (MQ=255) cGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGCACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGCGGCCCCGGCCGAc > 1:392449/1‑136 (MQ=255) cGGTTCCCGGCAACCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGCGGCCCCGGCCGAc < 2:70256/136‑1 (MQ=255) | TACATCAAGAGCCCTGGCGGGGTGGACGAGGTGGATAACGCGCTGGTCGCTGGCTTGAAGATTCAGTCGTCATTCTGAGGCAACTTGTTGTAAATTTACGCCAATCCATTTTCGGTTCCCGGCACCCACTGGTCTGCAGTGGGTGTTGGGGATAGGCCGAGACAGCGCTATCTCAAACAACAAGAGCTCTGAACCATGCCCGAACATCCGCTCCATCGCTTCTTCTCCTCGCAGCGGCCCCGGCCGAC > NC_002947/1168454‑1168701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |