Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4973659	4973729	71	2 [0]	[1] 2	fliC	flagellin

CTGCCATCAGCAACGGTGATGTCCTGGTCAGCGAACAGCGACAGAGTGCTGCTGCCGGCATTAACCACAACGCTGGCGTTGACACCGGTGCTGGCGGCGTT  >  NC_002947/4973558‑4973658                                                                                                     | ctgcCATCAGCAACGGTGATGTCCTGGTCAGCGAACAGCGACAGAGTGCTGCTGCCGGCATTAACCACAACGCTGGCGTTGACACCGGTGCTGGCGGCGtt  >  1:114829/1‑101 (MQ=255) ctgcCATCAGCAACGGTGATGTCCTGGTCAGCGAACAGCGACAGAGTGCTGCTGCCGGCATTAACCACAACGCTGGCGTTGACACCGGTGCTGGCGGCGtt  <  2:114829/101‑1 (MQ=255)                                                                                                     | CTGCCATCAGCAACGGTGATGTCCTGGTCAGCGAACAGCGACAGAGTGCTGCTGCCGGCATTAACCACAACGCTGGCGTTGACACCGGTGCTGGCGGCGTT  >  NC_002947/4973558‑4973658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑