Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4977541	4977837	297	2 [1]	[0] 2	flgL	flagellar hook‑associated protein FlgL

GCCTGCCACCGTCACTGCGTTGCCCGCCCCTACTGTACCCGAGCCAATCGGCTTGCTGTCGGCACTGTACGGCTGCGCATACAGAGAATACTCGGTGTCGCTGGTGAAGCGGATCACCGCGCCGTTGCTTGGGAAGGTGCTACGGTAAGCTTCCGGGTCGGTAACGCTGGTGCCGGTCACCTGCGCCGTCGACGGGTTGCCCGCGCTACGCGTCGCAGTGAGGGTAT  >  NC_002947/4977405‑4977631                                                                                                                                        |                                                                                            gCCTGCCACCGTCACTGCGTTGCCCGCCCCTACTGTACCCGAGCCAATCGGCTTGCTGTCGGCACTGTACGGCTGCGCATACAGAGAATACTCGGTGTCGCTGGTGAAGCGGATCACCGCGCCGTTGCTTGGGAAg                                                                                             <  1:162895/136‑1 (MQ=255)                                                                                            tCGGTGTCGCTGGTGAAGCGGATCACCGCGCCGTTGCTTGGGAAGGTGCTACGGTAAGCTTCCGGGTCGGTAACGCTGGTGCCGGTCACCTGCGCCGTCGACGGGTTGCCCGCGCTACGCGTCGCAGTGAGGGTAt  >  1:213559/1‑136 (MQ=255)                                                                                                                                        |                                                                                            GCCTGCCACCGTCACTGCGTTGCCCGCCCCTACTGTACCCGAGCCAATCGGCTTGCTGTCGGCACTGTACGGCTGCGCATACAGAGAATACTCGGTGTCGCTGGTGAAGCGGATCACCGCGCCGTTGCTTGGGAAGGTGCTACGGTAAGCTTCCGGGTCGGTAACGCTGGTGCCGGTCACCTGCGCCGTCGACGGGTTGCCCGCGCTACGCGTCGCAGTGAGGGTAT  >  NC_002947/4977405‑4977631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑