Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4977994	4978324	331	2 [1]	[1] 2	flgL	flagellar hook‑associated protein FlgL

CGGCTGACCAGCGGCAAACTGATTGCCGTAGGTGGTGGCCGAGGTCAACAGGCCGCCAGACAGCAATACCTTGCCGTCATCCGGCGACGGTGCTACCAGGCTCGACTGGGTGCGGCTGTTGTTGGTGGCCTGGTCGAAAATGCTGTAGCCGGTGTCGTTGGTCGCCAGGCGCAAGGTGTCG  >  NC_002947/4977858‑4978038                                                                                                                                        |                                              cGGCTGACCAGCGGCAAACTGATTGCCGTAGGTGGTGGCCGAGGTCAACAGGCCGCCAGACAGCAATACCTTGCCGTCATCCGGCGACGGTGCTACCAGGATCGACTGGGTGCGGCTGTTGTTGGTGGCCTGGTCg                                               <  2:213559/136‑1 (MQ=255)                                              cAACACGGCGCCAGACAGCAATACCTTGCCGTCATCCGGCGACGGTGCTACCAGGCTCGACTGGGTGCGGCTGTTGTTGGTGGCCTGGTCGAAAATGCTGTAGCCGGTGTCGTTGGTCGCCAGGCGCAAGGTGTCg  <  1:19440/136‑1 (MQ=255)                                                                                                                                        |                                              CGGCTGACCAGCGGCAAACTGATTGCCGTAGGTGGTGGCCGAGGTCAACAGGCCGCCAGACAGCAATACCTTGCCGTCATCCGGCGACGGTGCTACCAGGCTCGACTGGGTGCGGCTGTTGTTGGTGGCCTGGTCGAAAATGCTGTAGCCGGTGTCGTTGGTCGCCAGGCGCAAGGTGTCG  >  NC_002947/4977858‑4978038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑