Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	1161290	1161336	47	2 [1]	[1] 3	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase

CGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACA  >  NC_002947/1161154‑1161302                                                                                                                                        |              ccaaaCATGCCCAATAGCCTGGGGGGCGTGGTGCGTTTGCTGAACCTGGGGGTGGGGGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGa               <  2:240415/133‑1 (MQ=255)              aTAGCCTGGGGGGGGTGGTTTGCTTGCTGAACGGGCGGGTGGGCGGGCTGGGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACa  <  2:51304/136‑1 (MQ=37)                                                                                                                                        |              CGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACA  >  NC_002947/1161154‑1161302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑