Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	1316673	1316769	97	2 [0]	[1] 2	[rapA]	[rapA]

AATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGG  >  NC_002947/1316635‑1316672                                      | aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCgg  >  1:244000/1‑38 (MQ=255) aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCgg  <  2:244000/38‑1 (MQ=255)                                      | AATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGG  >  NC_002947/1316635‑1316672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑