Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4325313	4325353	41	2 [0]	[1] 2	PP_3791	site‑specific recombinase

AGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGTGGAGAGATGCACTGAGGCGTGTAGCCGGCTTGGGAAAAGACAATCCTCGCTGTGGAGTTGGGCTTGATGTATCCAGGCCTGTAGGGCCAGTCGCGTTTGCTCTGTAATTTCAAACTGTACGGGAC  >  NC_002947/4325315‑4325489                                        |                                                                                                                                        aGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGTGGAGAGATGCACTGAGGCGTGTAGCCGGCTTGGGAAAAGACAATCCTCGCTGTGGAGTTGGGCTTGATGTATCCAGGCCTGTAggg                                         >  1:13800/1‑136 (MQ=255)                                        tACTGCCGGGTGGAGAGATGCACTGAGGCGTGTAGCCGGCTTGGGAAAAGACAATCCTCGCTGTGGAGTTGGGCTTGATGTATCCAGGCCTGTAGGGCCAGTCGCGTTTGCTCTGTAATTTCAAACTGTACGGGAc  <  2:127262/136‑1 (MQ=255)                                        |                                                                                                                                        AGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGTGGAGAGATGCACTGAGGCGTGTAGCCGGCTTGGGAAAAGACAATCCTCGCTGTGGAGTTGGGCTTGATGTATCCAGGCCTGTAGGGCCAGTCGCGTTTGCTCTGTAATTTCAAACTGTACGGGAC  >  NC_002947/4325315‑4325489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑