Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4940002	4940048	47	3 [1]	[1] 2	flhA	flagellar export pore protein

CGTGGCCGATCAGCTCGTGGCAGTGTTTCTGCAGGATCTGGTTGAGGTGGGTGGCCACCACAGTGCTGGCATCGACCACGGTGTAACCCAGCGACTGCGCCTGTGAGCGCTGGCCGACGTCGATCCACACCGCTTCCAGGCCAAACG  >  NC_002947/4940038‑4940184            |                                                                                                                                        cGTGGCCGATCAGCTCGTGGCAGTGTTTCTGCAGGATCTGGTTGAGGTGGGTGGCCACCACAGTGCTGGCATCGACCACGGTGTAACCCAGCGACTGCGCCTGTGAGCGCTGGCCGACGTCGATCCACACCGCTTc             >  1:137928/1‑136 (MQ=255)            aGCTCGTGGCAGTGTTTCTGCAGGATCTGGTTGAGGTGGGTGGCCACCACAGTGCTGGCATCGACCACGGTGTAACCCAGCGACTGCGCCTGTGAGCGCTGGCCGACGTCGATCCACACCGCTTCCAGGCCAAACg  >  2:209607/1‑136 (MQ=255)            |                                                                                                                                        CGTGGCCGATCAGCTCGTGGCAGTGTTTCTGCAGGATCTGGTTGAGGTGGGTGGCCACCACAGTGCTGGCATCGACCACGGTGTAACCCAGCGACTGCGCCTGTGAGCGCTGGCCGACGTCGATCCACACCGCTTCCAGGCCAAACG  >  NC_002947/4940038‑4940184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑