Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4962750	4962778	29	2 [1]	[0] 2	fliG	flagellar motor switch protein

GACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTGGACATGTTCT  >  NC_002947/4962779‑4962846 |                                                                    gACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTGGACATGTTCt  >  1:213453/1‑68 (MQ=255) gACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTGGACATGTTCt  <  2:213453/68‑1 (MQ=255) |                                                                    GACCCGTACCGGCCCTTTGGCCTCCAGATCGTCACGCAGCAGTTCCGAAGCACGTTTGGACATGTTCT  >  NC_002947/4962779‑4962846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑