Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4971113	4971206	94	2 [0]	[1] 2	fliS	flagellar chaperone

GAGCGAGCCCTCCATCAGCAACTGCACCAGGCGGTGCGGAGTGGCTTCAGAAATCTGGGCGTGGGAATTGACCTTCTGGTACTGGCGAAGGGCTCTCATCGGGTGCATGGGGGATCCTCTTTGAACGGGGCTACACAGGGGCTACATACCTAAGTGATCGGCTTAGCCCCAAAGATCTTGAATACGACCATCAGTCGTCGTTATTGGCCTTGTTCATCGCG  >  NC_002947/4971122‑4971342                                                                                      |                                                                                                                                        gagcgagcCCTCCATCAGCAACTGCACCAGGCGGTGCGGAGTGGCTTCAGAAATCTGGGCGTGGGAATTGACCTTCTGGTACTGGCGAAGGGCTCTCATCGGGTTCTTGGGGGATCCTCTTTGAACGGGGCTacac                                                                                       <  1:49545/136‑1 (MQ=255)                                                                                      cGAAGGGCTCTCATCGGGTGCATGGGGGATCCTCTTTGAACGGGGCTACACAGGGGCTACATACCTAAGTGATCGGCTTAGCCCCAAAGATCTTGAATACGACCATCAGTCGTCGTTATTGGCCTTGTTCATcgcg  >  2:242537/1‑136 (MQ=255)                                                                                      |                                                                                                                                        GAGCGAGCCCTCCATCAGCAACTGCACCAGGCGGTGCGGAGTGGCTTCAGAAATCTGGGCGTGGGAATTGACCTTCTGGTACTGGCGAAGGGCTCTCATCGGGTGCATGGGGGATCCTCTTTGAACGGGGCTACACAGGGGCTACATACCTAAGTGATCGGCTTAGCCCCAAAGATCTTGAATACGACCATCAGTCGTCGTTATTGGCCTTGTTCATCGCG  >  NC_002947/4971122‑4971342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑