Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4974332	4974579	248	2 [1]	[1] 2	fliC	flagellin

GTTTCCAGGTTGATATTGTCAACCACATCCTGCAGGGTGTCGCCTGCCGCAGCAGCGATGGTGGTGGTGGTGGTACCAACGTTCAGCACCAAGTTACCGGCAGCAGCACCGATGGTCGGCTTATCAAATACGCCCGCGCCTGCAGTACCCACAACCGAAGCAGAAGTGCTGCCAGCATTGTTGGTGCCGAACTTACCGGCTGCACCGGTGACGCTGGCTTGCAGGGTAGCAACACCGCCGGCAACGCTGGCTTCG  >  NC_002947/4974461‑4974715                                                                                                                        |                                                                                                                                        gTTTCCAGGTTGATATTGTCAACCACATCCTGCAGGGTGTCGCCTGCCGCAGCAGCGATGGTGGTGGTGGTGGTACCAACGTTCAGCACCAAGTTACCGGCAGCAGCACCGATGGTCGGCTTATCAAATACGCCcg                                                                                                                         >  1:69923/1‑136 (MQ=255)                                                                                                                        cTTATCAAATACGCCCGCGCCTGCAGTACCCACAACCGAAGCAGAAGTGCTGCCAGCATTGTTGGTGCCGAACTTACCGGCTGCACCGGTGACGCTGGCTTGCAGGGTAGCAACACCGCCGGCAACGCTGGCTTCg  >  2:87824/1‑136 (MQ=255)                                                                                                                        |                                                                                                                                        GTTTCCAGGTTGATATTGTCAACCACATCCTGCAGGGTGTCGCCTGCCGCAGCAGCGATGGTGGTGGTGGTGGTACCAACGTTCAGCACCAAGTTACCGGCAGCAGCACCGATGGTCGGCTTATCAAATACGCCCGCGCCTGCAGTACCCACAACCGAAGCAGAAGTGCTGCCAGCATTGTTGGTGCCGAACTTACCGGCTGCACCGGTGACGCTGGCTTGCAGGGTAGCAACACCGCCGGCAACGCTGGCTTCG  >  NC_002947/4974461‑4974715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑