Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4988742	4988769	28	2 [1]	[1] 2	flgB/cheR	flagellar basal‑body rod protein FlgB/chemotaxis protein methyltransferase

TGACGTCAGTGTTTTCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGAGCTCGGCAGGAACAGCGGATAGGCATACAAAAAGGCCGGCATCTCTCGATACCGGCCTTCGTGCTTACTTGGCCTGGTAGATGATCCCCGGGCTGCACTGC  >  NC_002947/4988748‑4988905                       |                                                                                                                                        tGACGTCAGTGTTTTCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGAGCTCGGCAGGAACAGCGGATAGGCATACAAAAAGGCCGGCATCTCTCGATACCGGCCTTCGTGCTTACTTGGCCTGGtt                        >  1:142574/1‑135 (MQ=255)                       cggccTCTTCGCGGGTAAACCCGCTCCTACGGGGAGCTCGGCAGGAACAGCGGATAGGCATACAAAAAGGCCGGCATCTCTCGATACCGGCCTTCGTGCTTACTTGGCCTGGTAGATGATCCCCGGGctgcactgc  <  1:142494/136‑1 (MQ=255)                       |                                                                                                                                        TGACGTCAGTGTTTTCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGAGCTCGGCAGGAACAGCGGATAGGCATACAAAAAGGCCGGCATCTCTCGATACCGGCCTTCGTGCTTACTTGGCCTGGTAGATGATCCCCGGGCTGCACTGC  >  NC_002947/4988748‑4988905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑