Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5067761	5067806	46	2 [1]	[1] 3	PP_4460	LysR family transcriptional regulator

CCTGAAGCGGCTCTACTCGTCAAAGACGTCGAGCAGTCGTTGTTGAGCATTGAGCGCATCGCTAATGCGGCTACCAATATCAAATCTTTGAAAATGGGGCGACTTGAAATAGCAGCATCGCCAAACATGGCGCTCTCTTTC  >  NC_002947/5067802‑5067942      |                                                                                                                                        ccTGAAGCGGCTCTACTCGTCAAAGACGTCGAGCAGTCGTTGTTGAGCATTGAGCGCATCGCTAATGCGGCTACCAATATCAAATCTTTGAAAATGGGGCGACTTGAAATAGCAGCATCGCCAAACATGGCGctcg       >  1:27692/1‑135 (MQ=255)      aGCGGCTCTACTCGTCAAAGACGTCGAGCAGTCGTTGTTGAGCATTGAGCGCATCGCTAATGCGGCTACCAATATCAAATCTTTGAAAATGGGGCGACTTGAAATAGCAGCATCGCCAAACATGGCGCTCTCtttg  >  2:48709/1‑135 (MQ=255)      aGCGGCTCTACTCGTCAAAGACGTCGAGCAGTCGTTGTTGAGCATTGAGCGCATCGCTAATGCGGCTACCAATATCAAATCTTTGAAAATGGGGCGACTTGAAATAGCAGCATCGCCAAACATGGCGCTCTCTTTc  >  1:158184/1‑136 (MQ=255)      |                                                                                                                                        CCTGAAGCGGCTCTACTCGTCAAAGACGTCGAGCAGTCGTTGTTGAGCATTGAGCGCATCGCTAATGCGGCTACCAATATCAAATCTTTGAAAATGGGGCGACTTGAAATAGCAGCATCGCCAAACATGGCGCTCTCTTTC  >  NC_002947/5067802‑5067942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑