| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4813173 | 1 (0.050) | 35 (1.900) | 10/240 | 0.4 | 34.8% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947 | 5993770 = | 130 (7.050) | intergenic (+59/‑487) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
GCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCC > NC_002947/4813045‑4813299 | gcgcTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCGTGGGAGGTGTTCGCCGGGGGATTTTCCGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGAGCGAGCGCCGCCCGCGcggcgct < 1:38365‑M1/136‑8 (MQ=255)gcgcTTTGGCGGGTAGGGGTTTGGCGGGAGGTTTTCAGCGCCTGGGTGGTGTTCGCCGGGGGATTTGCAGCGCCGGGGAGGTGTTCGCCGGGAGAGTTGCAGCGCCTGGGAGAGCGAGCGCCGCCCGCGCGgcgct < 1:385125/136‑2 (MQ=38) gggTAGGTGTTTGGCGGGAGGGTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaa < 1:468938‑M1/136‑18 (MQ=255) gttggtgtTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaac < 1:199784‑M1/133‑20 (MQ=255) gtgtTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGCTTTTCAGCGCCTGGGAGAGCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgc < 1:46471‑M1/136‑24 (MQ=255) gTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgttt < 1:174606‑M1/136‑38 (MQ=255) aGCGCCTGGTTGGTGTTCGCCGGGGGTTTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggcc < 2:53564‑M1/136‑44 (MQ=255) gtgGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:503503‑M1/135‑49 (MQ=255) gtgGGAGGTGTGCGCCGGGGGATTTTCTGGGCCTGGGAGGTGTTCGCCGGGTGTGTTTCAGCGCCTGGGAGATCGAGCGCGGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:33437‑M1/135‑49 (MQ=255) gggggtgGTGTGCGCCGGGGTATTTTCAGCGCCTGGGTGGGGTTCGCCGGTAGATTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:260866‑M1/134‑49 (MQ=255) cggggcgGTGTCGGCGGGGGGATTTTCTGCGCCTGGGAGGGGTTCGCCGGGAGAGTTTCAGCGCCTGGGCGACCGTGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:312159‑M1/134‑49 (MQ=255) cTGGGAGGGGGTCGCGGGGGCTTTTGCTGCGCCTGGTAGGTGTTCGCGGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:445352‑M1/136‑49 (MQ=255) ttCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTTGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgc > 2:291426‑M1/1‑78 (MQ=255) ttCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTTGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgc < 1:291426‑M1/89‑12 (MQ=255) gCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:377548‑M1/1‑75 (MQ=255) gCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:377548‑M1/124‑50 (MQ=255) cGCCGGAGGATTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:112260‑M1/92‑49 (MQ=255) cGCCGGAGGATTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc > 1:112260‑M1/1‑44 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:352362‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:113100‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:505929‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:114622‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:114753‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:414943‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:38952‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:259965‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:352362‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:38952‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:414943‑M1/1‑25 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:259965‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:114753‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:114622‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:113100‑M1/74‑50 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:505929‑M1/74‑50 (MQ=255) gagcgagCGCCGCCCGCGgggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccagttattcctgtgggacgcgcacgcgagccccctggcgcacgcctcgatatcgcgtcgtacaaacaaggcggtcg < 1:169506‑M1/133‑119 (MQ=255) cagcgagCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccagttattcctgtgggacgcgcacgcgagccccctggcgcacgcctcgatatcgcgtcgtacaaacaaggcggtcg < 2:459359‑M1/133‑119 (MQ=255) gccgccCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccagttattcctgtgggacgcgcacgcgagccccctggcgcacgcctcgatatcgcgtcgtacaaacaaggcggtcgcgcgcgcc < 2:529070‑M1/136‑127 (MQ=255) cgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccagtt > 1:534449‑M1/1‑4 (MQ=255) cgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccagtt < 2:534449‑M1/51‑48 (MQ=255) | GCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCC > NC_002947/4813045‑4813299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |