Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5387435	5387464	30	2 [0]	[0] 3	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR

CAACCTGTTCCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGAATGGC  >  NC_002947/5387386‑5387434                                                 | cAACCTGTTCCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGAATGGc  >  1:438354/1‑49 (MQ=255) cAACCTGTTCCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGAATGGc  <  2:438354/49‑1 (MQ=255)                                                 | CAACCTGTTCCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGAATGGC  >  NC_002947/5387386‑5387434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑