BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	2,384,391	C→A	Q227K (CAA→AAA)	cmpX →	protein CmpX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,384,391	0	C	A	99.5%	1473.0 / NA	415	Q227K (CAA→AAA)	cmpX	protein CmpX
Reads supporting (aligned to +/- strand): ref base C (1/0); major base A (192/220); minor base T (0/2); total (193/222)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 418 total aligned reads displayed.

CAGCTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAA  >  NC_002947/2384244‑2384537

   cTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTc                                                                                                                                               <  2:2602642/150‑1 (MQ=255)

    ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCg                                                                                                                                              >  2:5109460/1‑150 (MQ=255)

    ttGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCg                                                                                                                                              <  1:630905/150‑1 (MQ=255)

         gTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcag                                                                                                                                         >  2:2953758/1‑150 (MQ=255)

           gAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCcagca                                                                                                                                       <  1:7613318/150‑1 (MQ=255)

            aaaaCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCCGATCCTGGCCGGCATCTACGTGCGCGAGCGGTACAAAGTCGGCcagcag                                                                                                                                      >  1:2681822/1‑150 (MQ=255)

              aaCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGt                                                                                                                                    >  2:9083184/1‑150 (MQ=255)

              aaCCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGt                                                                                                                                    >  1:7152756/1‑150 (MQ=255)

                ccGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGc                                                                                                                                  <  2:4835813/150‑1 (MQ=255)

                ccGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGc                                                                                                                                  <  2:5278572/150‑1 (MQ=255)

                     ctgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAtt                                                                                                                             <  2:3483320/150‑1 (MQ=255)

                     ctgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGAtt                                                                                                                             <  1:4330450/150‑1 (MQ=255)

                      tgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTg                                                                                                                            <  2:2555186/150‑1 (MQ=255)

                      tgctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTg                                                                                                                            <  2:1409749/150‑1 (MQ=255)

                       gctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTgg                                                                                                                           >  1:6921381/1‑150 (MQ=255)

                        ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  2:4488405/150‑1 (MQ=255)

                        ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  1:1066787/150‑1 (MQ=255)

                        ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  1:2427821/150‑1 (MQ=255)

                        ctgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          <  1:8954753/150‑1 (MQ=255)

                         tgAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGgag                                                                                                                         >  1:3155512/1‑150 (MQ=255)

                           aaCCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGagag                                                                                                                       >  2:7571810/1‑150 (MQ=255)

                           aaCCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGagag                                                                                                                       <  1:6557163/150‑1 (MQ=255)

                             ccACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACCTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGt                                                                                                                     <  1:7948992/150‑1 (MQ=255)

                             acACGTCATCGTTTTCGGGCCGCTTACCGTTTGTCCGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGt                                                                                                                     <  1:3038587/149‑1 (MQ=255)

                              cACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTc                                                                                                                    <  1:701366/150‑1 (MQ=255)

                                  tCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAg                                                                                                                <  2:9395133/150‑1 (MQ=255)

                                  tCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAg                                                                                                                >  2:5711646/1‑150 (MQ=255)

                                   cATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAgg                                                                                                               <  2:4232281/150‑1 (MQ=255)

                                    aTCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGga                                                                                                                          >  1:2056572/1‑138 (MQ=255)

                                    aTCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAggg                                                                                                              >  2:7343173/1‑150 (MQ=255)

                                        ttATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCata                                                                                                          >  1:1005508/1‑150 (MQ=255)

                                          aTCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATc                                                                                                        <  1:1474120/150‑1 (MQ=255)

                                           tCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCg                                                                                                       >  2:3712507/1‑150 (MQ=255)

                                           tCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCg                                                                                                       >  2:855409/1‑150 (MQ=255)

                                            cGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCga                                                                                                      <  2:7956360/150‑1 (MQ=255)

                                             gggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     <  2:6827908/150‑1 (MQ=255)

                                             gggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     <  2:3857485/150‑1 (MQ=255)

                                              ggCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgagg                                                                                                    >  2:6036900/1‑150 (MQ=255)

                                                   aTTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATc                                                                                               >  2:5440162/1‑150 (MQ=255)

                                                   aTTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATc                                                                                               >  2:9133349/1‑150 (MQ=255)

                                                      aCCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGt                                                                                            >  1:253536/1‑150 (MQ=255)

                                                          ttGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     <  1:9088272/137‑1 (MQ=255)

                                                          ttGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCg                                                                                              <  1:8592525/144‑1 (MQ=255)

                                                          ttGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACgg                                                                                        <  1:931043/150‑1 (MQ=255)

                                                           tGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGt                                                                                       <  2:326398/150‑1 (MQ=255)

                                                            ggTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTg                                                                                      <  2:8663715/150‑1 (MQ=255)

                                                              tCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGaa                                                                                    <  2:1005544/150‑1 (MQ=255)

                                                                tGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     >  1:5360111/1‑131 (MQ=255)

                                                                tGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAga                                                                                  >  1:3380998/1‑150 (MQ=255)

                                                                   ccGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAgacga                                                                               >  2:6604075/1‑150 (MQ=255)

                                                                    cGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAgacgac                                                                              >  1:7408796/1‑150 (MQ=255)

                                                                          cTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGt                                                                                                                                    >  2:4103673/1‑90 (MQ=255)

                                                                          cTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACgctgct                                                                        >  2:4575281/1‑150 (MQ=255)

                                                                          cTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACgctgct                                                                        >  1:4040450/1‑150 (MQ=255)

                                                                           ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                       >  1:1026346/1‑150 (MQ=255)

                                                                           ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                       >  1:7811428/1‑150 (MQ=255)

                                                                           ttGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGctgctg                                                                       >  1:3849107/1‑150 (MQ=255)

                                                                            tGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGa                                                                      <  1:4105287/150‑1 (MQ=255)

                                                                             ggCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGAc                                                                     >  2:5912563/1‑150 (MQ=255)

                                                                                cATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCga                                                                  <  2:7991073/150‑1 (MQ=255)

                                                                                cATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCga                                                                  <  1:596417/150‑1 (MQ=255)

                                                                                    ggCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCgatgat                                                              <  1:8466329/150‑1 (MQ=255)

                                                                                     gCCTTGGGAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                             <  2:614702/150‑1 (MQ=255)

                                                                                     gCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                             <  2:1976454/150‑1 (MQ=255)

                                                                                       cTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGc                                                           <  1:1657710/150‑1 (MQ=255)

                                                                                       cTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGc                                                           <  1:6128656/150‑1 (MQ=255)

                                                                                       cTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGc                                                           <  2:467043/150‑1 (MQ=255)

                                                                                        ttGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCga                                                                                                      >  1:6768240/1‑106 (MQ=255)

                                                                                        ttGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCg                                                          >  2:6884283/1‑150 (MQ=255)

                                                                                        ttGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCg                                                          >  1:4540530/1‑150 (MQ=255)

                                                                                             aGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTg                                                     >  1:9403707/1‑150 (MQ=255)

                                                                                              gTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGatgatg                                                             >  1:7981912/1‑141 (MQ=255)

                                                                                               tCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     <  1:2923820/100‑1 (MQ=255)

                                                                                               tCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgt                                                   <  1:8400416/150‑1 (MQ=255)

                                                                                               tCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgt                                                   <  2:9296562/150‑1 (MQ=255)

                                                                                                 gcgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCgag                                                                                                     >  1:527633/1‑98 (MQ=255)

                                                                                                 gcgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgtgt                                                 <  1:8261981/150‑1 (MQ=255)

                                                                                                 gcgAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGgtgt                                                 >  2:1508317/1‑150 (MQ=255)

                                                                                                   gtagatGCCGGCCAGGATCTGCCCGGCATCTACGTGCGCGAGCTGTCCAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCa                                               >  2:2148893/6‑150 (MQ=255)

                                                                                                      aTTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTg                                            >  1:7537339/1‑150 (MQ=255)

                                                                                                             ggCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAAcc                                     >  2:2839266/1‑150 (MQ=255)

                                                                                                             ggCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAAcc                                     <  2:638635/150‑1 (MQ=255)

                                                                                                                    ccTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgct                              <  2:8266412/150‑1 (MQ=255)

                                                                                                                    ccTGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgct                              >  2:7073182/1‑150 (MQ=255)

                                                                                                                      tGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCga                                                                                                      <  2:222469/76‑1 (MQ=255)

                                                                                                                      tGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCga                                                                                                      >  1:222469/1‑76 (MQ=255)

                                                                                                                      tGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                            <  1:5647563/150‑1 (MQ=255)

                                                                                                                      tGGCCGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgc                            <  1:4920734/150‑1 (MQ=255)

                                                                                                                         ccGGCATCTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTg                         <  2:9559859/150‑1 (MQ=255)

                                                                                                                            gCATCTACGTGCGCGAGCTGTACACAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgatgatga                      <  2:7792906/150‑8 (MQ=255)

                                                                                                                                cTACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgcg                  >  1:1939825/1‑150 (MQ=255)

                                                                                                                                 tACGTGCGCGAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAgc                   >  2:7625794/1‑148 (MQ=255)

                                                                                                                                        gcgAGCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATa          <  1:7701149/150‑1 (MQ=255)

                                                                                                                                            gCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgct                           >  2:7269762/1‑129 (MQ=255)

                                                                                                                                            gCTGTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAgctgct                           <  1:7269762/129‑1 (MQ=255)

                                                                                                                                               gTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACt                                             <  1:9599242/108‑1 (MQ=255)

                                                                                                                                               gTACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTa   >  1:5856458/1‑150 (MQ=255)

                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTaa  >  2:7737868/1‑150 (MQ=255)

                                                                                                                                                tACAAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTaa  >  2:3115662/1‑150 (MQ=255)

                                                                                                                                                tACAAAGTCGGCCAGCAGGCGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCAc                                              >  2:2455738/1‑106 (MQ=255)

CAGCTTGAAGTGAAAACCGACCTGCTGAACCACGTCATCGTTATCGGGCTGATTACCGTTGGTCTGGCCGTTGCCTTGGCCATGGGCCTTGGCAGTCGCGAAATTGCCGGGCAGATCCTGGCCGGCATCTACGTGCGCGAGCTGTACCAAGTCGGCCAGCAGGTGCGGATTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAA  >  NC_002947/2384244‑2384537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`