| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,165,856 | C→T | T238I (ACC→ATC) | gtsC → | mannose/glucose ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,165,856 | 0 | C | T | 99.2% | 1346.0 / ‑2.7 | 381 | T238I (ACC→ATC) | gtsC | mannose/glucose ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (209/169); total (210/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 382 total aligned reads displayed.
GCATCATCCTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGC > NC_002947/1165709‑1166002 | gcATCATCCTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCa < 2:719141/150‑1 (MQ=255) catcatCCTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAg < 1:2777700/150‑1 (MQ=255) catcatCCTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAg < 2:1254129/150‑1 (MQ=255) catcatCCTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAg > 1:9022296/1‑150 (MQ=255) cTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCggg > 1:2056866/1‑150 (MQ=255) cGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCa < 2:5925033/150‑1 (MQ=255) gATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCaa > 1:2286374/1‑150 (MQ=255) tGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGACGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAgg < 1:5355177/150‑1 (MQ=255) tCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGaa < 2:8597517/150‑1 (MQ=255) tCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGaa > 2:1480623/1‑150 (MQ=255) tCCACGCCGATCATCATGGACTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGaa < 1:5541547/150‑1 (MQ=255) ccACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAAt > 1:7202251/1‑150 (MQ=255) cGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCCAGGAATACAACg > 2:5619540/1‑150 (MQ=255) gATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACga > 1:2181429/1‑149 (MQ=255) gATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGt < 2:7904926/150‑1 (MQ=255) gATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGt < 2:4880016/150‑1 (MQ=255) atcatcATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTc < 2:7373699/150‑1 (MQ=255) atcatGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGAc < 1:1251236/150‑1 (MQ=255) tcatGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACa > 1:3721440/1‑150 (MQ=255) tcatGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACa > 2:6690120/1‑150 (MQ=255) gCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAg < 2:7557177/150‑1 (MQ=255) ccTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCagcagc > 1:5727330/1‑150 (MQ=255) tGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGACTACAACGTCGACATGGCGGCAGCga > 2:8904815/1‑150 (MQ=255) tGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCga > 1:839825/1‑150 (MQ=255) tGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCga < 1:4782361/150‑1 (MQ=255) gATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCgat < 1:8657495/150‑1 (MQ=255) tGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGACTACAACGTCGACATGGCGGCAGCGATGATc > 2:5674017/1‑150 (MQ=255) tGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACg < 1:4156255/127‑1 (MQ=255) ggCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAg < 1:7536843/116‑1 (MQ=255) gCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGc < 2:3015555/150‑1 (MQ=255) gCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGc > 2:1401448/1‑150 (MQ=255) gCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGc > 1:968702/1‑150 (MQ=255) gCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGc > 1:189893/1‑150 (MQ=255) cAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCACCCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCt < 2:8254552/150‑1 (MQ=255) aGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTg < 1:5023062/150‑1 (MQ=255) aGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTg > 1:6072732/1‑150 (MQ=255) aGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTg < 1:2694632/150‑1 (MQ=255) gTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTgg > 1:1126100/1‑150 (MQ=255) ttCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGc > 1:8011760/1‑150 (MQ=255) aCCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGACTACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTg > 2:8576465/1‑150 (MQ=255) aCCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGACTACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTg > 1:4938203/1‑150 (MQ=255) ccAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGcc > 2:1861795/1‑150 (MQ=255) aGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCaa > 1:9430241/1‑150 (MQ=255) ggAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCctgc > 1:3279876/1‑150 (MQ=255) ggAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCctgc < 2:4602734/150‑1 (MQ=255) ggAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCctgc > 2:313901/1‑150 (MQ=255) gAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCctgct > 1:4346634/1‑150 (MQ=255) gAACGACTGCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGGCCTGAACATTCTGGTCAATATCCGCACCGGGGCCAGGGAATAGCACGTCGGCAGGGCGGCAGCGAGGAGCGCTGGCCTGCCAACCcggcg > 2:264625/1‑149 (MQ=255) cTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTa > 2:4272022/1‑150 (MQ=255) gTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACgtggt < 1:7985625/150‑1 (MQ=255) ttCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACgtggtg > 2:5210687/1‑150 (MQ=255) tCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGtggtgg < 1:5870266/150‑1 (MQ=255) tCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGtggtgg < 1:854843/150‑1 (MQ=255) gCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCga > 1:350691/1‑108 (MQ=255) aggtgTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTggcaggca > 2:6641544/2‑150 (MQ=255) gtgtTCTCCAGCGGTGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCaaa < 1:1433294/150‑1 (MQ=255) gtgtTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCaaa > 2:9103164/1‑150 (MQ=255) gtgtTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCaaa < 1:3884689/150‑1 (MQ=255) gtgtTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCaaa > 2:525817/1‑150 (MQ=255) tgtTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAat < 2:6950017/150‑1 (MQ=255) gtTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAata > 1:7632643/1‑150 (MQ=255) ctcCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATAttt > 1:6257787/1‑150 (MQ=255) tcCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGTCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTc > 1:6605116/1‑150 (MQ=255) tcCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTc < 2:2097205/150‑1 (MQ=255) tcCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTc < 2:1905986/150‑1 (MQ=255) tcCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTc < 1:1480641/150‑1 (MQ=255) gaaGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAAt > 2:4999997/3‑72 (MQ=255) cAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTc < 2:3531650/148‑1 (MQ=255) cAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGt > 2:6556447/1‑150 (MQ=255) cAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGt > 2:1683058/1‑150 (MQ=255) aGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTg > 1:2914658/1‑150 (MQ=255) gcggcgATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTgc < 2:3863265/150‑1 (MQ=255) ttCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAAGACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCt < 2:1444137/150‑1 (MQ=255) gCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAc < 2:7703893/150‑1 (MQ=255) cAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAcg < 2:4068673/150‑1 (MQ=255) cAACCGATCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAcg > 1:3971619/1‑150 (MQ=255) aTCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTggca < 2:79860/117‑1 (MQ=255) tCACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGgcg < 2:9430241/150‑1 (MQ=255) cACCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGACAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGgcgc < 1:4492235/150‑1 (MQ=255) aCCGTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCCGGCCGTCAGCCCgcgca < 2:6810896/150‑2 (MQ=255) gTAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTc > 1:6933436/1‑150 (MQ=255) tAGCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCa > 2:2488899/1‑150 (MQ=255) gCCCTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCATGCGCGGGCTGACGGCCGGCGCGGTCAAg < 2:5484365/150‑1 (MQ=255) cccTGAACAATCTGGTCGATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAgg < 2:3241532/150‑1 (MQ=255) cccTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAgg < 1:7266512/150‑1 (MQ=255) cccTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAgg < 2:3279792/150‑1 (MQ=255) cTGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTc > 2:2247374/1‑117 (MQ=255) tGAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGgcgc > 1:876494/1‑139 (MQ=255) gAACAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCctgc > 1:8251840/1‑86 (MQ=255) aaCAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTggcagg < 1:5255833/104‑1 (MQ=255) aaCAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCaa < 1:2485131/143‑1 (MQ=255) aaCAATCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTaa > 2:6386362/1‑150 (MQ=255) aaTCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATggcg > 1:8716757/1‑51 (MQ=255) tCTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTACGCCAt > 1:102223/1‑150 (MQ=255) cTGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATg < 2:3721440/150‑1 (MQ=255) tGGTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATgg > 2:8830929/1‑150 (MQ=255) gTCAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCa > 2:4397318/1‑150 (MQ=255) cAATATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAAc > 1:6855664/1‑150 (MQ=255) aaTATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACg > 2:6147719/1‑150 (MQ=255) aaTATCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACg > 2:2426730/1‑150 (MQ=255) | GCATCATCCTGCCGATGTCCACGCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGC > NC_002947/1165709‑1166002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |