Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,349,487 Δ1 bp 15.0% intergenic (+65/‑113) pgi‑II → / → acsA‑II glucose 6‑phosphate isomerase/acetyl‑CoA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,349,4870A.15.0% 268.2 / 54.6 107intergenic (+65/‑113)pgi‑II/acsA‑IIglucose 6‑phosphate isomerase/acetyl‑CoA synthetase
Reads supporting (aligned to +/- strand):  ref base A (44/35);  new base . (12/4);  total (61/46)
Fisher's exact test for biased strand distribution p-value = 1.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.82e-01

Only 100 of 109 total aligned reads displayed.

CTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGCCCTGGCC  >  NC_002947/5349338‑5349635
                                                                                                                                                       |                                                                                                                                                     
cTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGa                                                                                                                                                       <  1:2148078/150‑1 (MQ=255)
cTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCC‑‑CCAACCAGGCCACGCGTTACCTCGTAGGa                                                                                                                                                       >  2:4441177/1‑150 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  2:2001357/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  2:1390199/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  1:747229/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  1:747017/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  2:4833604/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  1:746998/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  2:3076153/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  2:3896786/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  1:3607329/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCATTACCTCGTAGGAGCgg                                                                                                                                                  <  1:853105/150‑1 (MQ=255)
    gTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGACCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCgg                                                                                                                                                  <  2:2771913/150‑1 (MQ=255)
      cGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGt                                                                                                                                                <  1:910311/150‑1 (MQ=255)
      cGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGt                                                                                                                                                <  2:1937909/150‑1 (MQ=255)
          aGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCTAGGCCTGATCAACTACGTCCGCGGCCGTCTCCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCTACGCGTGACCTCGTAGGAGCGGGTTTAc                                                                                                                                            <  2:3737950/150‑1 (MQ=38)
          aGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTAc                                                                                                                                            <  1:689647/150‑1 (MQ=21)
          aGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTAc                                                                                                                                            <  2:3351704/150‑1 (MQ=255)
            ccTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTAccc                                                                                                                                          <  1:5428720/150‑1 (MQ=255)
            ccTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACGTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTAccc                                                                                                                                          <  2:2414142/150‑1 (MQ=18)
              tGGCAGACCGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCcgc                                                                                                                                        <  2:5103239/150‑1 (MQ=255)
              tGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTACCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCcgc                                                                                                                                        <  2:2255310/150‑1 (MQ=255)
                gAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGa                                                                                                                                      <  2:4276066/150‑1 (MQ=255)
                 aaGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGaa                                                                                                                                     <  1:917469/150‑1 (MQ=255)
                 aaGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGaa                                                                                                                                     <  2:2244528/150‑1 (MQ=255)
                   gACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAaga                                                                                                                                   <  2:4242079/150‑1 (MQ=255)
                     cAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAgg                                                                                                                                 <  2:457057/150‑1 (MQ=255)
                        cgcCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCTCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGGTACCTCGTAGGAGCGGGTTTACCCGCGAAGAggccg                                                                                                                              >  2:3124463/1‑150 (MQ=255)
                        cgcCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAggccg                                                                                                                              <  2:3723849/150‑1 (MQ=255)
                                  ggTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGGTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTg                                                                                                                    >  2:4136648/1‑150 (MQ=255)
                                        aCCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCGAACACGCAACGCGGTAACAACTAGGAGCGGGTTTACCCCCGCAGAGGCCGGCCCAGGGTTAACAcc                                                                                                              >  2:2840545/1‑150 (MQ=255)
                                        aCCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCC‑‑CCAACCAGGCCACGCGTTACCTCGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGGCCAGGTTGAGCAcc                                                                                                              >  2:2840357/1‑150 (MQ=38)
                                        aCCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCGCGTCGCGGGGGAAACCC‑‑CCAACCCCGCCACGCGGTACCGCCGAGGGGCGGGGTTTACCCCCGAGAGGCCCGCCCCGGGTGTACAcc                                                                                                              >  1:1229682/1‑150 (MQ=255)
                                          ccAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCAACCAGGCAACGCGTTAACTAGTAGGGGCGGGTTTAACCCCGAAGAGGCCGGCCCAGGTTGAAAAACGc                                                                                                            >  2:2612496/1‑150 (MQ=38)
                                            aaGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAAACCC‑‑CCAACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCCCGCAGAGGCCGGCCCCCGTTGAAAAccccac                                                                                                          >  2:1647008/1‑146 (MQ=38)
                                               gCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTCAACCCC‑‑CCTACCCGGCCCCGCGGTACCTCGTAGGCGCGGGGTTACCCGCGCAGAGGCCGGCCCCGGTTGTACAACGCTCCCa                                                                                                       >  2:5323514/1‑150 (MQ=255)
                                                            ctTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTGAACCCC‑‑CCGACCCGGCCACCCGGTACCACGGAGGGGCGGGGTTACCCGCGCAGAGGCCGGCCCCGGGTGAACACCCCGCCCACCTACACCGTcgt                                                                                          >  2:4716421/1‑148 (MQ=255)
                                                            ctTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCAACCAGGCCACGCGGTACCACGGAGGCGCGGGGTTACCCCCGCAGAGGCCCGCCCCCGGTGAAAACCCCACCCCCCGACACAGTCtt                                                                                          >  2:4716474/1‑150 (MQ=255)
                                                                       gTCACCGCGTTTGATCCGAGCTTGTGCCGCCCTCTTCGGGGTTAAACCCG‑‑CCTACCAGCCACCGCGTTACCTCGTAGGAGCGGTTTTACCCGCGACGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGcc                                                                               <  2:805094/150‑1 (MQ=255)
                                                                       gTCACCGCGGTTGATCCGAGCGTGTGCCGGCCTCTTCGCGGGTAAGCCCG‑‑CCTACCAGGCAACGCGTTTCCTCGGAGGAGCGGGGTTACCCGCGAAGAGGCCGGCCCAGGGTGAACACCGCTCCCCGCGACACTGGCTTATCGAAGAGcc                                                                               >  2:5128762/1‑150 (MQ=255)
                                                                          aCCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCCAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCAACACAGTCATATAGAATAGCCGtt                                                                            >  2:2692489/1‑150 (MQ=38)
                                                                                 ttGATCCGAGCTTGTGCCGGCCTCTTAGCCGGTAAAACCG‑‑CCCACCCCGCCACCCCGTACCGCGGAGGAGCCGGGTTAACCCCGAAGACGCCGGCCCCCGGTGGACACCCCACCCACCCACACAGGCTTATCGAAAAGCCCGTGCAGTcc                                                                     >  2:4850895/1‑150 (MQ=255)
                                                                                           cTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCtt                                                           <  2:5614945/150‑1 (MQ=255)
                                                                                            ttGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTa                                                          >  2:5076219/1‑150 (MQ=255)
                                                                                              gggcgggCCTGTTGGGGGGTAACCCCG‑‑CATACCGGGAACGGGGTTACCTGGTAGGTGGGGGTTTACCGGGTACGTGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACa                                                        <  2:3349057/145‑1 (MQ=255)
                                                                                               ggcgggCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGTGCGGGTTTACCCGCGATGTGGCCGGTCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACaa                                                       <  2:3890483/146‑1 (MQ=39)
                                                                                                    gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCAACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCATACAAGAGCa                                                  >  2:3358147/1‑150 (MQ=18)
                                                                                                     ccTCTTGGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTCCCTCGTAGGTGGGGGTTTACCCGCGACGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAg                                                 <  2:3149159/150‑1 (MQ=255)
                                                                                                       tctTCGGGGTTAAACCCG‑‑CCTACCCGGCAAGGGTTTACCTGTTTGTAGGGGTTTTACCCGCTATGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGa                                               <  2:775041/150‑1 (MQ=255)
                                                                                                       tctTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCCCAGGTTGAACACCGCACCCAGCTACACTGTCTTATAGAATATCCGTTGCAGTCCATCGCCCCTTACAAGAGAAGGa                                               >  1:4969588/1‑150 (MQ=39)
                                                                                                        ctgcgcgGGTAAACCCG‑‑CCTACCAGGCACCGCGTTACCTGGTCGGCGCGGTTTTACCCGCGATGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGac                                              <  2:3385316/147‑1 (MQ=255)
                                                                                                          tCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGacca                                            >  1:3308131/1‑150 (MQ=255)
                                                                                                            gcgGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGaccacc                                          >  1:1965136/1‑150 (MQ=255)
                                                                                                            gcgGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGaccacc                                          >  1:1965257/1‑150 (MQ=255)
                                                                                                                 tAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCa                                     >  2:161872/1‑150 (MQ=255)
                                                                                                                   aaCCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATg                                   >  2:3160097/1‑150 (MQ=255)
                                                                                                                    acccgctccTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGt                                  >  1:1039199/8‑150 (MQ=25)
                                                                                                                    acccgctccTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCGTACAAGAGAAGGACCACCCGCCATGt                                  >  2:5237921/8‑150 (MQ=25)
                                                                                                                    aCCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCa                                                  <  1:1637730/134‑1 (MQ=255)
                                                                                                                    aCCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCa                                                  >  2:1637730/1‑134 (MQ=255)
                                                                                                                    aCCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGt                                  >  2:1320866/1‑150 (MQ=255)
                                                                                                                      ccgctccTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGTGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCTGTCCATCGCCCCTTCCAAGAGCAGGACCACCCGCCATGTTc                                >  2:3688599/6‑150 (MQ=25)
                                                                                                                      ccgctccTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTc                                >  1:3202970/6‑150 (MQ=25)
                                                                                                                      ccgctccTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTc                                >  1:221189/6‑150 (MQ=25)
                                                                                                                      ccG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTc                                >  1:5028188/1‑150 (MQ=255)
                                                                                                                        gctccTACGAGGTAACGCGTTGCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTc                                >  1:5598136/4‑150 (MQ=38)
                                                                                                                        gctccTACGAGGTAACGCGTTGCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTc                                >  1:2039572/4‑150 (MQ=38)
                                                                                                                          tccTACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCACAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGata                            >  2:1701132/2‑150 (MQ=37)
                                                                                                                             tACGAGGTAACGCGTTGCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGatat                           >  1:2463409/1‑150 (MQ=255)
                                                                                                                             tACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCCTGTTCGATAGcc                         >  1:3245195/1‑150 (MQ=37)
                                                                                                                             tACGAGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATcc                         >  1:819133/1‑150 (MQ=37)
                                                                                                                             tACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGatat                           >  1:4067086/1‑150 (MQ=255)
                                                                                                                             tACCAGGCAACGCGTTACCTCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGATGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCAGGTTCGatat                           >  2:261692/1‑150 (MQ=255)
                                                                                                                               ccAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGaccacc                                          >  1:3628274/1‑133 (MQ=255)
                                                                                                                               ccAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGaccacc                                          <  2:3628274/133‑1 (MQ=255)
                                                                                                                                gaGGTAACGCGTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCa                      >  2:5625931/2‑150 (MQ=38)
                                                                                                                                 aGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGc                       >  2:641772/1‑150 (MQ=255)
                                                                                                                                  ggCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCa                      >  2:3218650/1‑150 (MQ=255)
                                                                                                                                     aaCGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAAt                   >  2:416736/1‑150 (MQ=255)
                                                                                                                                      ccgggTTACCTGGTCGGCGGGGTTTTCCCCGCGACGCGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATa                  <  1:4514343/146‑1 (MQ=255)
                                                                                                                                      aCGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACaa                                                       >  1:1288790/1‑113 (MQ=255)
                                                                                                                                      aCGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACaa                                                       <  2:1288790/113‑1 (MQ=255)
                                                                                                                                      aCGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACaa                                                       >  1:1288751/1‑113 (MQ=255)
                                                                                                                                        gcgTTGCCTGGTAG‑‑GCGGGTTTACCCGCGAAGAGGCCGGCACAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAcccc              <  2:789385/150‑1 (MQ=38)
                                                                                                                                        gcgTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAcc                >  2:3671703/1‑150 (MQ=255)
                                                                                                                                        gcgTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAcc                >  2:4421952/1‑150 (MQ=255)
                                                                                                                                         gtttACCTCGTCGTTGGGGGTTTACCGGCTATGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAccc               <  2:648868/148‑1 (MQ=255)
                                                                                                                                          gTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTCCAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAcccc              >  2:4075781/1‑150 (MQ=255)
                                                                                                                                          gTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAcccc              >  2:3875549/1‑150 (MQ=255)
                                                                                                                                           ttACGTCGTCGGCGCGGTTTTACCCGCTACGCGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAccccc             <  2:1534122/150‑1 (MQ=255)
                                                                                                                                           ttACCTCGTAGCAGCGGGTTTACCCGCTAAGAGCCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATAccccc             <  2:823056/150‑1 (MQ=255)
                                                                                                                                               cTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGc         >  1:1663368/1‑150 (MQ=255)
                                                                                                                                               cTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGc         >  1:4083423/1‑150 (MQ=255)
                                                                                                                                               cTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGc         >  1:383746/1‑150 (MQ=255)
                                                                                                                                                tCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGcc        >  2:4879978/1‑150 (MQ=255)
                                                                                                                                                tCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGcc        >  2:4809618/1‑150 (MQ=255)
                                                                                                                                                tCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCACAGATACACTGTCTTATCGAATAGCCGTTGCAGTCAATCGCACCTTACAATAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCACCAGGcc        >  2:712388/1‑150 (MQ=39)
                                                                                                                                                 cGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGccc       >  2:4754893/1‑150 (MQ=255)
                                                                                                                                                    aGGAGCGGTTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGCCCTgg    <  2:1351793/150‑1 (MQ=255)
                                                                                                                                                      gAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGCCCTGGcc  <  1:4421952/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
CTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGTTGATCCGAGCTTGTGCCGGCCTCTTCGCGGGTAAACCCG‑‑CCTACCAGGCAACGCGTTACCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGTTGAACACCGCTCCCAGCTACACTGTCTTATCGAATAGCCGTTGCAGTCCATCGCCCCTTACAAGAGCAGGACCACCCGCCATGTTCGATATCCGCAAATACCCCCAGGCCCTGGCC  >  NC_002947/5349338‑5349635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: