Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,065,054:1 +T 6.3% coding (248/891 nt) iciA → chromosome initiation inhibitor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,065,0541.T 6.3% 1422.7 / 85.0 334coding (248/891 nt)iciAchromosome initiation inhibitor
Reads supporting (aligned to +/- strand):  ref base . (162/151);  new base T (12/9);  total (174/160)
Fisher's exact test for biased strand distribution p-value = 6.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

TTCCCAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAGGAAGTGGGCC  >  NC_002947/1064905‑1065203
                                                                                                                                                      |                                                                                                                                                     
ttCCCAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTAcc                                                                                                                                                        >  2:3627957/1‑150 (MQ=255)
  cccAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCgg                                                                                                                                                     <  1:1230420/150‑1 (MQ=255)
   ccAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGgc                                                                                                                                                    >  1:5131534/1‑150 (MQ=255)
   ccAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGgc                                                                                                                                                    >  1:5439250/1‑150 (MQ=255)
    cAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGgcg                                                                                                                                                   >  1:1357128/1‑150 (MQ=255)
     aGCGCATCAAGGTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGgcgc                                                                                                                                                  <  2:5364850/150‑1 (MQ=255)
        gcATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCAGGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCGGTACCTGGCGCTgc                                                                                                                                               <  2:4842196/150‑2 (MQ=255)
             aaGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGaa                                                                                                                                          >  1:563031/1‑150 (MQ=255)
             aaGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCGGTACCTGGCGCTgcaggtc                                                                                                                                          <  2:1902375/150‑7 (MQ=255)
             aaGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCGGTACCTGGCGCTgcaggtc                                                                                                                                          <  2:2513005/150‑7 (MQ=255)
              aGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAag                                                                                                                                         >  1:679046/1‑150 (MQ=255)
               gTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCCACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAaga                                                                                                                                        <  2:1777186/150‑1 (MQ=255)
                ttGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAagag                                                                                                                                       <  1:247913/150‑1 (MQ=255)
                ttGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAagag                                                                                                                                       >  1:4182174/1‑150 (MQ=255)
                ttGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAagag                                                                                                                                       <  1:4278013/150‑1 (MQ=255)
                 ttcTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGGGACCTGCAGCGCCAGGTACCGGCGGTGGACGAAGAgg                                                                                                                                      <  2:4465442/148‑1 (MQ=255)
                 tGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAgg                                                                                                                                      <  1:3067507/150‑1 (MQ=255)
                    ttGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCGGTACCTGGCGCTgca                                                                                                                                              <  1:3261385/139‑3 (MQ=255)
                       aGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTCCAGCGCCGGTACCTGGCGCTgc                                                                                                                                               >  1:3528924/1‑134 (MQ=255)
                           gcgGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGa                                                                                                                            <  1:2401487/150‑1 (MQ=255)
                               gTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAgagc                                                                                                                        <  1:1803532/150‑1 (MQ=255)
                                  ggCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCGTGCCGGAGCGCCTg                                                                                                                     >  1:2598672/1‑150 (MQ=255)
                                  ggCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTg                                                                                                                     <  2:1500455/150‑1 (MQ=255)
                                     cAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTgcgc                                                                                                                  >  2:5056492/1‑150 (MQ=255)
                                        ccGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATc                                                                                                               <  2:4571615/150‑1 (MQ=255)
                                           gTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGcc                                                                                                            >  2:2463911/1‑150 (MQ=255)
                                           gTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGcc                                                                                                            <  2:3515500/150‑1 (MQ=255)
                                           gTGCTGGTACGGGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGcc                                                                                                            <  1:4699128/150‑1 (MQ=255)
                                                ggTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCaa                                                                                                       >  1:2164630/1‑150 (MQ=255)
                                                   aCGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGc                                                                                                    >  1:3214457/1‑150 (MQ=255)
                                                    cGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGcc                                                                                                   <  1:1989931/150‑1 (MQ=255)
                                                    cGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGcc                                                                                                   <  2:5561742/150‑1 (MQ=255)
                                                     gTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAagag                                                                                                                                       <  2:1562832/113‑1 (MQ=255)
                                                     gTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCg                                                                                                  >  2:461810/1‑150 (MQ=255)
                                                       gCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAgc                                                                                                                          <  1:1723516/124‑1 (MQ=255)
                                                       gCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGAt                                                                                                >  1:3707037/1‑150 (MQ=255)
                                                        ccTCGCCGCCCGGCGCGACCTAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACGTGCAGCGCCAGGTACGGGCGCTGGACGACGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATa                                                                                               <  1:4297677/150‑1 (MQ=255)
                                                        ccTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGa                                                                                                 >  2:2364451/1‑148 (MQ=255)
                                                        ccTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGa                                                                                                 <  1:2364451/148‑1 (MQ=255)
                                                        ccTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATa                                                                                               <  1:1526317/150‑1 (MQ=255)
                                                         cTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGagag                                                                                              >  1:3012741/1‑150 (MQ=255)
                                                         cTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAg                                                                                              <  2:2131429/150‑1 (MQ=255)
                                                         cTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAg                                                                                              >  1:4863162/1‑150 (MQ=255)
                                                          tCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGc                                                                                             >  2:3961839/1‑150 (MQ=255)
                                                          tCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGc                                                                                             >  1:5032834/1‑150 (MQ=255)
                                                          tCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGc                                                                                             >  1:4135512/1‑150 (MQ=255)
                                                          tCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGc                                                                                             >  1:2268083/1‑150 (MQ=255)
                                                            gccgccCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCt                                                                                           >  2:1184187/1‑150 (MQ=255)
                                                             ccgccCGGCGCGACCGAAGTCGGCCGCCAGCTGCTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTg                                                                                          <  2:202442/150‑1 (MQ=255)
                                                             ccgccCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTg                                                                                          >  1:208490/1‑150 (MQ=255)
                                                                cccGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGcc                                                                                       >  2:1044421/1‑150 (MQ=255)
                                                                     cgcgACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCtg                                                                                  >  2:4442109/1‑150 (MQ=255)
                                                                      gcgACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCtgg                                                                                 >  1:4942616/1‑150 (MQ=255)
                                                                             aaGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCg                                                                          >  2:2859354/1‑150 (MQ=255)
                                                                                  ggCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGcgcg                                                                     <  2:5159679/150‑1 (MQ=255)
                                                                                  ggCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGcgcg                                                                     >  2:5254181/1‑150 (MQ=255)
                                                                                    ccgccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGt                                                                   <  2:1293735/150‑1 (MQ=255)
                                                                                     cgccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTg                                                                  <  1:4830408/150‑1 (MQ=255)
                                                                                      gccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTgg                                                                 <  1:928792/150‑1 (MQ=255)
                                                                                      gccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTgg                                                                 <  1:2371246/150‑1 (MQ=255)
                                                                                      gccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTgg                                                                 <  1:2763480/150‑1 (MQ=255)
                                                                                      gccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTgg                                                                 <  1:3419204/150‑1 (MQ=255)
                                                                                       ccAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTggg                                                                <  2:3463775/150‑1 (MQ=255)
                                                                                          gCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCaa                                                             <  2:2628761/150‑1 (MQ=255)
                                                                                               tCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCt                                                        >  2:3068162/1‑150 (MQ=255)
                                                                                                 aaCCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTgc                                                      >  2:787476/1‑150 (MQ=255)
                                                                                                    cATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGca                                                   >  2:3291134/1‑150 (MQ=255)
                                                                                                         gcagcaGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCacaaca                                              <  2:1407517/150‑1 (MQ=255)
                                                                                                          cagcagGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAg                                             <  2:4218906/150‑1 (MQ=255)
                                                                                                             cagGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAAc                                          <  2:3330116/150‑1 (MQ=255)
                                                                                                                  gcgcCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCt                                     <  2:3214457/150‑1 (MQ=255)
                                                                                                                    gcCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTga                                   <  1:1143423/150‑1 (MQ=255)
                                                                                                                       tGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTgaccg                                >  1:1127629/1‑150 (MQ=255)
                                                                                                                       tGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTgaccg                                <  2:576140/150‑1 (MQ=255)
                                                                                                                          tCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTgaccgacc                             >  2:1983264/1‑150 (MQ=255)
                                                                                                                            gAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCtg                           >  1:1608216/1‑150 (MQ=255)
                                                                                                                            gAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCtg                           >  1:1892454/1‑150 (MQ=255)
                                                                                                                             aaCGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCtgg                          <  1:4791550/150‑1 (MQ=255)
                                                                                                                              aCGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCtggt                         <  2:4986806/150‑1 (MQ=255)
                                                                                                                                gcgACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCtggtgg                       >  2:3092030/1‑150 (MQ=255)
                                                                                                                                 cgACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTggtggt                      <  1:3373605/150‑1 (MQ=255)
                                                                                                                                  ttcgtccAGCGCCGGTACCTGGCGCTGCACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGtt                     >  2:5091747/7‑150 (MQ=255)
                                                                                                                                  ttcgtccAGCGCCGGTACCTGGCGCTGCACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGtt                     >  2:4154901/7‑150 (MQ=255)
                                                                                                                                  ttcgtccAGCGCCGGTACCTGGCGCTGCACGAAGACGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCGGGAGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGtt                     >  2:2975436/7‑150 (MQ=255)
                                                                                                                                  gACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGtt                     <  1:5360580/150‑1 (MQ=255)
                                                                                                                                   aCCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTg                    <  1:4606190/150‑1 (MQ=255)
                                                                                                                                    ccTGCAGCGCCAGGTACCGGCGCTTGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGa                   <  1:600086/150‑1 (MQ=255)
                                                                                                                                    ccTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGa                   <  1:5254164/150‑1 (MQ=255)
                                                                                                                                      tGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACACCAGAACGTGCTGACCGACCTGGTGGTTGAgg                 >  2:4807753/1‑150 (MQ=255)
                                                                                                                                      tGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAgg                 >  1:2960391/1‑150 (MQ=255)
                                                                                                                                      tGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAgg                 <  2:2200789/150‑1 (MQ=255)
                                                                                                                                       gCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGa                >  1:4461741/1‑150 (MQ=255)
                                                                                                                                       gCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGGggagga                >  2:4347803/1‑150 (MQ=255)
                                                                                                                                          gcgcCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCa             <  1:3327214/150‑1 (MQ=255)
                                                                                                                                          gcgcCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCa             >  1:2220725/1‑150 (MQ=255)
                                                                                                                                           cgcCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAg            <  1:3938011/150‑1 (MQ=255)
                                                                                                                                           cgcCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAg            <  2:3776062/150‑1 (MQ=255)
                                                                                                                                            gcCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAgg           >  1:3980029/1‑150 (MQ=255)
                                                                                                                                                ggTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAGGAAGt       <  2:5439250/150‑1 (MQ=255)
                                                                                                                                                     cGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAGGAAGTGGGcc  >  1:1414003/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TTCCCAGCGCATCAAGTTGCTTGAGGCGCGGGTCGGCCAGCCGGTGCTGGTACGTGCCTCGCCGCCCGGCGCGACCGAAGTCGGCCGCCAGCTACTCAACCATGTGCAGCAGGTGCGCCTGCTCGAACGCGACCTGCAGCGCCAGGTACCGGCGCTGGACGAAGAGGGCATGCCGGAGCGCCTGCGCATCGCCCTCAACGCCGATAGCCTGGCCACCTGGTGGGCCGGCGCGGTGGGCAACTTCTGCGCACAACAGAACGTGCTGACCGACCTGGTGGTTGAGGACCAGGAAGTGGGCC  >  NC_002947/1064905‑1065203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: