| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1836611 = | 232 (0.960) | 12 (0.050) | 9/260 | NT | 5.1% | coding (499/711 nt) | yfiP | hypothetical protein |
| ? | NC_002947 | 1836643 = | 231 (1.010) | coding (531/711 nt) | yfiP | hypothetical protein | |||||
CCGCTTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1836766‑1836611‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcgaTGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACG > NC_002947/1836643‑1836791 CCGCTTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTA < 2:2012130/150‑1CCGCTTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTA < 1:2145298/150‑1 TTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGC < 1:1646692/150‑1 TTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGC < 2:5577821/150‑1 TTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGC < 1:5621390/150‑1 TTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGC < 1:4416598/150‑1 GCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGA < 2:1162678/150‑1 AAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTAC > 2:512676/1‑150 ATGATCATCGCGCTTGGAGCGCCGCAGGCGGTCGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCT > 1:1934973/1‑150 ATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCT > 1:1934891/1‑150 TGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGC < 2:5544707/142‑1 TGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGC > 1:5544707/1‑142 ATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGG > 2:4591992/1‑150 TCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGC < 2:1503155/84‑1 TCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGC > 1:1503155/1‑84 CGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCA > 1:4687169/1‑150 CGCGCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCA > 1:4687179/1‑150 CGCGCGTGGAGCGCCGCAGGCGGTCGCGCGAGGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCCGGCTTCGCCGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCAGTACCTGAGCGGCA > 1:3874810/1‑150 GCTTGGAGCGCCGCAGGCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGC > 1:1140151/1‑150 GCGGTAGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGA < 1:4591992/150‑1 AGCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGTTGCCGCTTGACGAGC < 1:2423685/150‑1 GCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCA > 1:4745864/1‑150 GCGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCA < 1:3744632/150‑1 CGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGCTCGTCAAGCGGCAGCCGCCGCTTGCCGctcag < 2:3533222/150‑6 CGCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGCTCGTCAAGCGGCAGCCGCCGCTTGCCGctcag < 2:3067867/150‑6 GCGATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGG < 1:2515570/150‑1 GATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGAC > 2:3532766/1‑150 GATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGAC < 2:5399155/150‑1 GATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGAC < 1:3274583/150‑1 ATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACG > 2:3841573/1‑150 ATGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACG > 2:960159/1‑150 CCGCTTGCCGCTCAGGTAATGCAGGCTGAACACATCCAGATAGGCATCCAGCGCCTGCGAAGCCTGGCCATCGCCAGCAAGGTCCAGGCACATCGCCGCAACTTCTGCCGTACAGAAATGATCATCGCGCTTGGAGCGCCGCAGGCGGTAGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1836766‑1836611‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcgaTGATCATTTCTGTACGGCAGAAGTTGCGGCGATGTGCCTGGACCTTGCTGGCGATGGCCAGGCTTCGCAGGCGCTGGATGCCTATCTGGATGTGTTCAGCCTGCATTACCTGAGCGGCAAGCGGCGGCTGCCGCTTGACGAGCAGGACG > NC_002947/1836643‑1836791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |