| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2092666 = | 169 (0.700) | 14 (0.060) | 4/258 | NT | 8.5% | intergenic (+487/+431) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| ? | NC_002947 | 2092758 = | 142 (0.620) | intergenic (+579/+339) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase | |||||
GTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2092821‑2092666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAA > NC_002947/2092758‑2092906 GTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGC < 2:5190485/150‑1GTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGC < 1:5292947/150‑1 TAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCc > 2:5223998/1‑149 CCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCAACCAGGGGCCCAGCGCATGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGC > 2:2398135/1‑150 CAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCC > 2:4727093/1‑150 CAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCC < 2:5512014/150‑1 CAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCAGGGGCCCAGCGCTTGACGGGCAACCATGCCCGTCACCACCCACCGCAAGCC > 1:1727426/1‑150 CCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCGTCCGGGGGCCCAGAGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGGGAGGGGACCCCGGAGCGTGGCGGCGGGGCCGGCTGATGGGCGC > 1:4090431/1‑150 TCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGCGCCagcgtt > 2:4560296/1‑144 TCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T > 2:110356/1‑150 TCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T > 1:5080843/1‑150 TCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T > 1:5377884/1‑150 TCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCGTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGCGCCGACGGc > 1:71272/1‑149 CGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGCCCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGG‑C‑TT > 1:853423/1‑150 CGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGG‑C‑TT > 1:853352/1‑150 CGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGAGGAGGGGAGCCGACGG‑C‑TT > 1:853141/1‑150 GGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCGTGCCCGTCACCTCCCTCCGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGC‑T‑TTT > 1:1232485/1‑150 GGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTT > 1:4528257/1‑150 GACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCCAGCGT‑TGTTTGGTTAC‑TTTttgtcgc > 2:204646/1‑143 TCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTT‑TTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCG > 1:1986007/1‑150 TCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTCGGGGCCGGATGAGGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAA > 1:4472717/1‑150 TCCGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTAC > 1:4095401/1‑150 CAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGA > 2:595272/1‑150 AAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAT > 2:1921526/1‑150 AAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAT > 2:1866484/1‑150 AAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAT > 1:908467/1‑150 GCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGC > 1:990761/1‑150 GCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGC > 1:696250/1‑150 GCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGC > 2:585898/1‑150 CCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGTTGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGA < 2:3682266/150‑1 CCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGA > 1:92583/1‑150 CGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGAGGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCTGAAAGGTGAATAGGCGCCTACATAGTGAATGAATGTCTACTTTATGCTAA > 2:4560694/1‑150 CGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAA > 1:1875084/1‑150 GTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2092821‑2092666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGG‑T‑TTTGGTTAC‑TTTGGCCACGAC‑CAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAA > NC_002947/2092758‑2092906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |