| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2306488 = | 162 (0.670) | 10 (0.050) | 8/246 | NT | 6.5% | intergenic (‑140/‑191) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| ? | NC_002947 | 2306573 = | 140 (0.650) | intergenic (‑225/‑106) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein | |||||
GTAGTTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2306650‑2306488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaTGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCA > NC_002947/2306573‑2306721 GTAGTTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCAC > 2:2337828/1‑150 AGTTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGC < 2:1213779/150‑1 AGTTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGC < 1:3197928/150‑1 TTTGCTCGAACACAATTTTTCCTCCTCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCACACGCGGTGCCATGCACCCCTAAGGAATCTTCGCGCGCACGCCC > 1:3410273/1‑150 CTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAACATGCCAGGCAAGCGGGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTC < 2:3172203/150‑1 CTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTC > 1:775681/1‑150 CTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTC > 1:3306272/1‑150 CTCGAACAAAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCACGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTC < 1:4086306/150‑1 TCGAACCAATTTTTTCCGCCGCAATCAACGGCGATACAACTGAAAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCGTGCCCGCgaa < 1:1063903/150‑4 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 1:2398791/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 1:2915571/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 1:2398487/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 1:2398769/1‑150 GAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCA > 2:445275/1‑150 GAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCA > 2:445072/1‑150 AACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCAC > 2:3667728/1‑150 TGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTTGCCGGGCATTGTGGTCCGTTGTCTCGCCGTTGATTGCGGCGGgaca > 2:4987807/1‑146 GAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAG > 2:2824576/1‑150 CGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCTCCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGGTCGAGCAA > 2:4158954/1‑150 CGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAA > 1:2778755/1‑150 GCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAC > 1:3332382/1‑150 GCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTT > 1:810885/1‑113 GCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTT < 2:810885/113‑1 CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACT > 1:3578196/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACT > 1:2171000/1‑150 CGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTG > 1:4617318/1‑150 GCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCAT > 1:5368257/1‑150 GCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCAT < 1:4430575/150‑1 GCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCAT > 1:3476348/1‑150 GCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCAT > 1:3476214/1‑150 CCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATAC > 1:5294174/1‑150 GCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGG > 2:4189930/1‑150 GCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGG < 1:2816646/150‑1 ACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTC > 1:1247504/1‑150 CATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCC < 1:2896580/150‑1 ATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCAGTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCA > 2:4229/1‑150 ATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCA > 1:900801/1‑150 ATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCA > 2:3208486/1‑150 GTAGTTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2306650‑2306488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaTGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCA > NC_002947/2306573‑2306721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |