New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5110406 = | 252 (1.040) | 22 (0.100) | 14/258 | NT | 8.8% | coding (2703/3021 nt) | ydiJ | putative oxidoreductase |
? | NC_002947 | 5110440 = | 220 (0.970) | coding (2669/3021 nt) | ydiJ | putative oxidoreductase |
CGGTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5110562‑5110406 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcagcACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCG > NC_002947/5110440‑5110587 CGGTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGACTGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACC > 2:1559203/1‑150 CGGTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACC > 1:718003/1‑150 aTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGG < 2:3499440/149‑1 GTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGG < 1:5485228/150‑1 GTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGG < 1:5485370/150‑1 GTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGG < 1:1620224/150‑1 GTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTGGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGG < 2:5251018/150‑1 TGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGG < 1:1382330/150‑1 TGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGG < 1:1915634/150‑1 TGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGG < 1:1915641/150‑1 TGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGG < 2:1008913/150‑1 TGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGG < 2:1639480/150‑1 TGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGG < 1:1188537/150‑1 CCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGC > 2:1896213/1‑150 CGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCA > 2:662939/1‑129 CGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCA < 1:662939/129‑1 TGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGGTGCGGCAGGCGCCTGCTCGGGCAGCACATCCATCAACCATTCCTGCGGCA < 1:887106/150‑1 agggTGGTGTATCGCCAGGATTATCATAATGTGCCTGGCCTGGAGGGTTGCCCGATGGTGCTGCTGCCGCAGTATTGGTTGTTGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGC < 1:5483541/146‑1 CGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGCGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGGTGCGGCAGGCGCCTGCTCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCA < 2:55117/150‑1 CGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGACGGTGCTGCTGCCGCAGGACTGGTTGATGGATGTGCTGCCCGGTGCGGCAGGCGCCTGCTCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCA < 2:55295/150‑1 GCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCCTCAACCATTCCTGCGGCAGCGGCACCGTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACCCCAGCGTCATCGC > 2:327476/1‑150 CAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCC > 1:4636776/1‑150 TGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCG > 2:4609210/1‑150 GCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGG > 1:4831082/1‑150 GCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGG > 2:425624/1‑150 CTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGC > 2:674451/1‑150 CTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGC > 1:1351883/1‑150 TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCA > 1:115623/1‑150 TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCA > 1:1814064/1‑150 TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCA > 1:2280812/1‑150 TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCA > 1:4172106/1‑150 TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGG < 2:1130262/88‑1 TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGG > 1:1130262/1‑88 CCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACA > 2:5334640/1‑150 CCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACAC > 2:2185035/1‑150 CGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACC > 2:1493966/1‑150 CGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACC > 2:1494193/1‑150 GCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCCCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGC > 2:3916507/1‑150 CGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGA < 2:5454529/150‑1 CGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGA < 1:929655/150‑1 CGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGA < 1:5560557/150‑1 CGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGA < 1:4762622/150‑1 CGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGA < 1:4706159/150‑1 GGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAG > 2:1928313/1‑150 GGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAG > 2:963201/1‑150 GGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGC > 1:1292099/1‑150 GCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCT < 2:4490398/150‑1 GCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCT > 1:2298555/1‑150 CAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTG > 1:4533829/1‑150 AGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGC > 2:3336080/1‑150 AGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGC < 2:1583026/150‑1 AGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGC < 1:4073213/150‑1 AGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGC < 1:3040733/150‑1 GCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCG > 2:4388018/1‑150 CGGTGTGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5110562‑5110406 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcagcACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCG > NC_002947/5110440‑5110587 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |