| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5278997 = | 188 (0.780) | 14 (0.060) | 8/248 | NT | 8.8% | intergenic (+22/+84) | rlmG/PP_4649 | ribosomal RNA large subunit methyltransferase G/hypothetical protein |
| ? | NC_002947 | 5279070 = | 120 (0.550) | intergenic (+95/+11) | rlmG/PP_4649 | ribosomal RNA large subunit methyltransferase G/hypothetical protein | |||||
TGAGCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5279157‑5278997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaagcccgctGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCAAACC > NC_002947/5279070‑5279218 TGAGCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGG < 2:1508487/150‑1TGAGCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGG < 2:2287167/150‑1 GAGCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGG < 1:1693965/150‑1 AGCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGC < 2:3336535/150‑1 GCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCA < 1:3648313/150‑1 CGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTTCCCACGAAGCAGGCAACGCGCTAGATGGCAAAGGCGTTGCCGGTGTTAGCGGGCAA > 2:3864795/1‑150 CGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTTCCCACGAAACACGCAACCCGCTAGATGGCACAGGCGTTGCCCGTGTTGGCGGGCAA > 2:2579027/1‑150 CAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTAGCCCACGAAGCAGGCAACGCCCTAGATTGCACAGGCGTTGCCGGTGTTAGCGGGCAAGCCCc > 2:4670436/1‑149 AGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGC < 1:1775162/150‑1 GGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGG < 1:2451219/102‑1 GGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGG > 2:2451219/1‑102 TTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACG > 2:5010505/1‑150 CCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACA < 2:3554885/122‑1 CCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACA > 1:3554885/1‑122 CCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCA > 2:3127769/1‑150 CCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCA > 2:1238229/1‑150 CCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCA > 2:2295781/1‑150 CCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCA > 2:2296128/1‑150 CCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCA > 2:353575/1‑150 CACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCAT > 1:1075843/1‑150 CACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCAT > 1:812262/1‑150 CACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCAT > 1:3640169/1‑150 GAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCTG‑CTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCC > 1:2056724/1‑150 AAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCC > 1:4728363/1‑150 GGCAACGCGCTAGATGTCACAGGCGTTGCCAG‑CTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTTTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGACACACCCAGCGCTGCGACGCTCATCGCCCAGATC > 1:4458452/1‑150 GGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTT < 2:833941/150‑1 GGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTT > 1:4512776/1‑150 GGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTT > 1:1022327/1‑150 GGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTT < 2:4520592/150‑1 GGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTG > 1:628553/1‑150 GGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTG > 2:5159127/1‑150 GGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTG > 1:775817/1‑150 gcaccCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGT < 1:2141619/145‑1 aaccCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTC < 1:163911/146‑1 CAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTC > 2:4242097/1‑150 AGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTT < 1:1316737/150‑1 AGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTT < 1:1316776/150‑1 AGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCACCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTT > 1:287976/1‑150 GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTC < 1:5245985/150‑1 CCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTT < 2:293211/140‑1 CCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTT > 1:293211/1‑140 CCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCAGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTACC > 1:4226191/1‑150 CCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCA < 2:1660000/150‑1 CCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCA > 2:695774/1‑150 CCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCA > 2:724174/1‑150 GCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCAAA > 1:4256858/1‑150 GCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCAAA > 1:4256807/1‑150 TGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGAATCACACAGTCCGCAACACCCAGAGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTAGCTGCCACAGCGGTTTCTTGTCTTCCAAACC > 2:1680024/1‑150 TGAGCGTCGCAGCGCTGGGTGTGGCGGCCTGTGTGATGCGGCTGTTCATGGGGGCGGCGGGCCTGACCACACACTGATAAAGAGCGGCAGCGGGCTTGCCCACGAAGCAGGCAACGCGCTAGATGGCACAGGCGTTGCCGGTGTTCGCGGGCAAGCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5279157‑5278997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaagcccgctGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTTCTTGTCTTCCAAACC > NC_002947/5279070‑5279218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |