| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6092577 | 194 (0.800) | 13 (0.060) | 10/256 | NT | 7.2% | intergenic (+23/‑207) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase |
| ? | NC_002947 | = 6092641 | 156 (0.690) | intergenic (+87/‑143) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase | |||||
GCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6092420‑6092577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGG < NC_002947/6092641‑6092493 GCCAAGCAGTTGCTGGCCGATGACCTGATGCCGATCTACCGGATTGGAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCT < 1:3587372/150‑1GCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTGTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCT < 1:2787259/150‑1 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 2:5148082/1‑150 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 2:4914522/1‑150 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 2:4914493/1‑150 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 2:2362961/1‑150 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 1:4584126/1‑150 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 1:4459710/1‑150 CAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCACCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 2:3512899/1‑150 CAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGG < 1:2328249/150‑1 CAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGG < 2:1308591/150‑1 CAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGG < 1:5148082/150‑1 AGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGACATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGG < 1:3369133/150‑1 TGGCCGATGACCAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTcatcc > 2:3023987/1‑145 GCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC > 1:4413685/1‑123 GCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTC < 2:4413685/123‑1 GCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGG‑TGACCT‑ATCCGGCCTTTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTT < 1:5530334/150‑1 TTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGG‑TGACCT‑ATCCGGCCTTTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCC > 2:4364684/1‑150 GGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCC > 1:405611/1‑150 GAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGC < 2:3565137/150‑1 GACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGG < 1:3057697/150‑1 GACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGG < 2:2833362/150‑1 AGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACC < 1:4061971/150‑1 AGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACC < 2:405611/150‑1 TTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCG > 1:5143138/1‑150 TCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGA < 2:5143138/150‑1 TTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGG‑TGACCT‑ATCCGGCCTTTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAAC < 1:4364684/150‑1 AGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGG > 2:4717816/1‑101 AGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGG < 1:4717816/101‑1 GCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAA > 1:3382997/1‑150 GGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAAC > 1:4090872/1‑150 GGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACT < 2:3177424/150‑1 GTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTG > 1:4661788/1‑150 TGAACCCGCTCCGACCATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGG < 2:2865716/150‑1 GCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6092420‑6092577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGG < NC_002947/6092641‑6092493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |