New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 742614NA (NA)5 (0.020) 5/264 NT NA coding (712/1422 nt) PP_0635 group II intron‑encoding maturase
?NC_002947 = 1431801 NA (NA)coding (743/1422 nt) PP_1250 group II intron‑encoding maturase

TCCTGATGGCCTGTATCGAGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGT  >  NC_002947/742507‑742656
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gcctgcgggCCTGTCTCGCGCGCCGGGGCAAAGATAAGTGCGTCCGCAGGCTTATTCGCCGCTACCGGGACGCCGGGCTCATGTCGGGCGGGGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGt  <  2:4580153/143‑1 (MQ=1)
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TCCTGATGGCCTGTATCGAGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGT  >  NC_002947/742507‑742656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.