New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1736154 =65 (0.270)9 (0.050) 9/218 NT 14.2% intergenic (‑76/+115) dapE/PP_1526 succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
?NC_002947 1736246 = 57 (0.300)intergenic (‑168/+23) dapE/PP_1526 succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase

Only 100 of 210 total aligned reads displayed.

GGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCG  >  NC_002947/1736007‑1736302
                                                                                                                                                   |                                                                                                                                                    
ggTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCC                                                                                                                                                    >  1:3122095‑M1/1‑150 (MQ=255)
catgcgcttctgggtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGcc                                                                                                                                                    >  2:3681649‑M1/148‑150 (MQ=255)
 atgcgcttctgggtggcgatggtgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGccc                                                                                                                                                   >  2:4843850‑M1/147‑150 (MQ=255)
 aggcgcttctgggtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGccc                                                                                                                                                   >  2:4242322‑M1/147‑150 (MQ=255)
  tGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCA                                                                                                                                                  <  2:1545103‑M1/150‑1 (MQ=255)
  tGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCA                                                                                                                                                  >  2:4463432‑M1/1‑150 (MQ=255)
   gcgcttctgggtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCAt                                                                                                                                                 <  1:461454‑M1/6‑1 (MQ=255)
    aCCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATT                                                                                                                                                <  1:3834127‑M1/150‑1 (MQ=255)
    aCCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATT                                                                                                                                                >  2:5606770‑M1/1‑150 (MQ=255)
     gcttctgggtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTc                                                                                                                                               <  1:2023154‑M1/8‑1 (MQ=255)
       ttctgggtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTcgc                                                                                                                                             <  1:386240‑M1/10‑1 (MQ=255)
       gAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGC                                                                                                                                             <  2:296701‑M1/150‑1 (MQ=255)
        tctgggtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTcgcg                                                                                                                                            >  1:3726321‑M1/140‑150 (MQ=255)
        aGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACTGCCCATTCGCG                                                                                                                                            <  2:3126833‑M1/150‑1 (MQ=255)
             gtggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCAc                                                                                                                                       <  1:2170027‑M1/16‑1 (MQ=255)
              gACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACG                                                                                                                                      >  1:5010034‑M1/1‑150 (MQ=255)
               ggcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGc                                                                                                                                     >  2:4592032‑M1/133‑150 (MQ=255)
                gcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGcc                                                                                                                                    <  1:3113741‑M1/19‑1 (MQ=255)
                gcgatgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGcc                                                                                                                                    >  2:2386493‑M1/132‑150 (MQ=255)
                   atgttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGc                                                                                                                                 >  1:732280‑M1/129‑150 (MQ=255)
                    tCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCg                                                                                                                                >  1:575125‑M1/1‑149 (MQ=255)
                    tCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCT                                                                                                                                >  1:5613081‑M1/1‑150 (MQ=255)
                     gttgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCGTGCCcgcga                                                                                                                               >  1:2720784‑M1/127‑148 (MQ=255)
                     cAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTC                                                                                                                               <  2:2063578‑M1/150‑1 (MQ=255)
                     cAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTC                                                                                                                               <  1:14816‑M1/150‑1 (MQ=255)
                       tgctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCAGTCGCGGGCACGCCCGCAccc                                                                                                                             <  2:3850926‑M1/26‑1 (MQ=255)
                        gctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCAGTCGCGGGCACGCCCGCtcccc                                                                                                                            <  2:3941673‑M1/27‑2 (MQ=255)
                        gctggtgcagtcgttgcctaatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCca                                                                                                                            <  2:2847017‑M1/27‑1 (MQ=255)
                        gTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCCCGCCCGCTCCCc                                                                                                                            >  1:3850926‑M1/1‑149 (MQ=255)
                        gTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCA                                                                                                                            <  1:4093243‑M1/150‑1 (MQ=255)
                         tCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGTGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCAC                                                                                                                           >  2:3113704‑M1/1‑150 (MQ=255)
                         tCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCAC                                                                                                                           <  1:828140‑M1/150‑1 (MQ=255)
                           gCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAg                                                                                                                         <  1:4151644/150‑1 (MQ=255)
                             aGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                       <  1:970196/150‑1 (MQ=255)
                               gCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTAc                                                                                                                     <  1:5046334/150‑1 (MQ=255)
                               gCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTAc                                                                                                                     >  2:73934/1‑150 (MQ=255)
                                agtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACt                                                                                                                    >  1:2919117‑M1/116‑150 (MQ=255)
                                  aGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGc                                                                                                                  <  1:3947852/150‑1 (MQ=255)
                                   gTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGca                                                                                                                 <  1:1395847/150‑1 (MQ=255)
                                             aGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGaa                                                                                                       <  2:3344135/150‑1 (MQ=255)
                                             aGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGaa                                                                                                       <  2:2052456/150‑1 (MQ=255)
                                              ggCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAAc                                                                                                      <  2:3827396/150‑1 (MQ=255)
                                               gCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACg                                                                                                     >  2:2478236/1‑150 (MQ=255)
                                                  cgagCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGTAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACTGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCt                                                                                                  <  2:5506930/149‑1 (MQ=255)
                                                    agCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCtgt                                                                                                <  2:4968911/150‑1 (MQ=255)
                                                    agCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCtgt                                                                                                <  2:129705/150‑1 (MQ=255)
                                                      gctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGc                                                                                              <  1:2472405‑M1/57‑1 (MQ=255)
                                                      cTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACCCCCCCACCCACACGTAAAGCACAACACTGAAAGCCAGTGc                                                                                              >  1:606039/1‑150 (MQ=255)
                                                       tCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCCCGCCCCCTCCCACCGGTACTGCACAGCTCTGAACGCCAGTGcc                                                                                             >  1:162275/1‑150 (MQ=255)
                                                        cGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCCCTCCCACAGGTACTGCACCGCTCTGAACGCCAGTGCCa                                                                                            >  1:3941673/1‑150 (MQ=255)
                                                           cAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGc                                                                                         <  2:3554020/150‑1 (MQ=255)
                                                             ggggCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCg                                                                                       <  2:2602780/150‑1 (MQ=255)
                                                              gggCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGg                                                                                      >  2:3494614‑M2/1‑149 (MQ=255)
                                                              gggCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGg                                                                                      >  1:3469582‑M2/1‑149 (MQ=255)
                                                               ggCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgt                                                                                     <  2:5446068‑M2/150‑3 (MQ=255)
                                                               ggCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgt                                                                                     >  2:717762‑M2/1‑148 (MQ=255)
                                                               ggCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgt                                                                                     >  2:1805152‑M2/1‑148 (MQ=255)
                                                                gCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACcggcttggcacaggcgttcagagcgggggagtaccggtg                                                                                    >  2:2989366‑M1/1‑111 (MQ=255)
                                                                gCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtg                                                                                    >  2:2246172‑M2/1‑147 (MQ=255)
                                                                 ccGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCTCAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgg                                                                                   >  1:3708527‑M2/1‑146 (MQ=255)
                                                                 ccGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgg                                                                                   >  2:5357756‑M2/1‑146 (MQ=255)
                                                                  cGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGggggg                                                                                  <  2:2023154‑M2/150‑6 (MQ=255)
                                                                   gTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtggga                                                                                 >  2:3753611‑M2/1‑144 (MQ=255)
                                                                    tCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACAGCACACCACTGAACGCCAGTGCCAAGCCCgggggag                                                                                <  1:4866734‑M2/150‑8 (MQ=255)
                                                                     cATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGTCGgtgggagc                                                                               >  1:5095657‑M2/1‑142 (MQ=255)
                                                                       tgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCgg                                                                             >  2:3291960‑M1/77‑150 (MQ=255)
                                                                       tGGGGGACTCCGGGGCAAGGCACGGCGGGGAAATCTGAGGGGCGTTATCTTATATCACATGGTTTCGGGCAGCACGGCCCAGTCGCGGGCACGCCCGCTCCCACcggcttggcacaggcgttcagagctgtgcagtacctgtgggagcgg                                                                             <  2:2721234‑M1/150‑47 (MQ=255)
                                                                       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACcggcttggcacaggcgttcagagctgtgcagtacctgtgggagcgg                                                                             <  2:5542332‑M1/150‑47 (MQ=255)
                                                                       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgg                                                                             >  2:4435139‑M2/1‑140 (MQ=255)
                                                                       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgg                                                                             >  2:675654‑M2/1‑140 (MQ=255)
                                                                       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgg                                                                             >  2:4807230‑M2/1‑140 (MQ=255)
                                                                       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgg                                                                             >  1:1785938‑M2/1‑140 (MQ=255)
                                                                        gggggACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcggg                                                                            >  1:2110035‑M2/1‑139 (MQ=255)
                                                                         tcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGc                                                                           >  1:1054694‑M1/75‑150 (MQ=255)
                                                                         ggggACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggc                                                                           >  1:410568‑M2/1‑138 (MQ=255)
                                                                           ggACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgt                                                                         >  1:2388397‑M2/1‑136 (MQ=255)
                                                                           ggACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgt                                                                         >  2:5613081‑M2/1‑136 (MQ=255)
                                                                               tCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgccc                                                                     <  2:386240‑M2/150‑19 (MQ=255)
                                                                                     gcaaggcaagGCGGGTAAATCTGAGGGGCTTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACcgggttggcacaggcgttcagagctgtgcagtacctgtgggagcgggcgtgcccgcgaat                                                               <  1:2989366‑M1/150‑61 (MQ=255)
                                                                                     gcaaggcaagGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCCCTCCCCCAGGTACAGCACACCACTGAAAGCCAGTGCCAAGCCGgggggcgcgggcgtgcccgcccat                                                               <  1:2847011‑M2/150‑25 (MQ=255)
                                                                                       gcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATgg                                                             >  2:4100014‑M1/61‑150 (MQ=255)
                                                                                        aggcaaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGG                                                                                                                                           >  1:4729404‑M1/1‑71 (MQ=255)
                                                                                        aggcaaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGG                                                                                                                                           <  2:4729404‑M1/71‑1 (MQ=255)
                                                                                            aaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGTGCACGACCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCAGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGc                                                        >  2:461454/1‑150 (MQ=255)
                                                                                            aaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGc                                                        >  2:5115433/1‑150 (MQ=255)
                                                                                                 ggggAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACAGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAgg                                                   >  2:3049850/1‑150 (MQ=255)
                                                                                                  gggAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGaa                                                                                                       >  1:4350214/1‑97 (MQ=255)
                                                                                                        tCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGccc                                            >  2:5223605/1‑150 (MQ=255)
                                                                                                        cccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGc                                                                                                                                                     <  1:1016336‑M1/2‑1 (MQ=255)
                                                                                                        cccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGc                                                                                                                                                     >  2:1016336‑M1/44‑45 (MQ=255)
                                                                                                           aagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCggg                                                                            <  2:1048035‑M1/75‑1 (MQ=255)
                                                                                                            aGGGGCGTTATCTTATATCAACTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGc                                        <  2:1683434/150‑1 (MQ=255)
                                                                                                            aGGGGCGTGATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGc                                        <  2:2786351/150‑1 (MQ=255)
                                                                                                              gggCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGACACGCCCGCTCCCCCAGGTACAGCACAGCTCTGAAAGCCTGTGCCAAGCCCGTGGGAGCGGGCGTGCCCCCGAATGGGCTGCACACGTCGGCCCACGCaa                                      >  1:3565124/1‑150 (MQ=255)
                                                                                                                    tATCTTATATCAATTGGTTTCGGGCAGCAGGGCCCATTCGCGGGCACGCCCGCTCCCACCGGTACTGCACAGCTCTGACCGCCTGGGCCACGCGGGTGGGAGCGGGCGGGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCaa                                <  1:4424024/150‑1 (MQ=38)
                                                                                                                     aTCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAg                               <  2:2134085/150‑1 (MQ=255)
                                                                                                                                      ttCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGGACTGCACAGCTCGGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGcc              >  2:89369/1‑149 (MQ=255)
                                                                                                                                      ttCGGGCAGCACGGCCAATTCGCGGGCACGCCCGCTCCCACTGGTACTGCACCGCACTGACCGCCTGTGCCAAGCCGGTGGGCGGGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCa              <  1:4463432/150‑1 (MQ=38)
                                                                                                                                             agcaCGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCGCTGAACGCCGGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCACGCAACTTCAAGCCGGCGGCGCGTGGGCAGCCtttt       >  1:1295796/1‑150 (MQ=38)
                                                                                                                                                 cGGCCCCTGCGCGGGCACGCCCGCCCCAACAGGTACGGCACCGCTCTGAACGCCTGTGCCACGCGGGTGGGTGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGc   <  1:5298823/150‑1 (MQ=38)
                                                                                                                                                   |                                                                                                                                                    
GGTGACCGAGGGGCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCTCGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCG  >  NC_002947/1736007‑1736302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.