New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 205102 =69 (0.290)11 (0.050) 7/262 NT 14.3% coding (10608/26049 nt) PP_0168 putative surface adhesion protein
?NC_002947 209747 = NA (NA)coding (15253/26049 nt) PP_0168 putative surface adhesion protein

GCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTGGGCACT  >  NC_002947/209612‑209767
                                                                                                                                       |                    
gttttgtcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACGGTGCCGGCCAACGGCACCGTg        <  1:109433‑M2/25‑1 (MQ=255)
gttttgtcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACGGTGCCGGCCAACGGCACCGTg        <  1:3039487‑M2/25‑1 (MQ=255)
gttttgtcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACCGTGCCGGCCAACGGCACCGTg        <  2:2941839‑M2/25‑1 (MQ=255)
  tttgtcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACCGTGCCGGCCAACGGCACCGTggg      <  1:3336617‑M2/27‑1 (MQ=255)
     gtcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACCGTGCCGGCCAACGGCACCGTGGGCAc   <  1:1904443‑M2/30‑1 (MQ=255)
      tcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACCGTGCCGGCCAACGGCACCGTGGGCACt  <  1:2089257‑M2/31‑1 (MQ=255)
                                                                                                                                       |                    
GCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTGGGCACT  >  NC_002947/209612‑209767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.