New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5791477 =127 (0.530)13 (0.070) 8/226 NT 11.9% intergenic (+15/‑116) PP_5068/trxC hypothetical protein/thioredoxin
?NC_002947 5791562 = 87 (0.440)intergenic (+100/‑31) PP_5068/trxC hypothetical protein/thioredoxin

Only 100 of 199 total aligned reads displayed.

ACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCA  >  NC_002947/5791417‑5791710
                                                                                                                                                 |                                                                                                                                                    
aCCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGaa                                                                                                                                                  >  2:432889/1‑150 (MQ=255)
 ccgccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAGGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGaaa                                                                                                                                                 <  1:1317436/150‑1 (MQ=255)
       gAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGa                                                                                                                                           <  1:2956061/150‑1 (MQ=255)
           ggggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAccc                                                                                                                                       <  1:4272475/150‑1 (MQ=255)
           ggggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAccc                                                                                                                                       <  2:58870/150‑1 (MQ=255)
                aaGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAacac                                                                                                                                  >  2:3906458/1‑150 (MQ=255)
                  gCACCTGGAAATCAGCTGCTCTTCCTTATTAGCGCCGAATCCTGTGGGTGGGGGGGTGCCCGCGACGCAGGCAACGTGTTGGTTTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCg                                                                                                                                <  1:1508006/150‑1 (MQ=37)
                  gCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCg                                                                                                                                >  2:1615445/1‑150 (MQ=255)
                    cccTGGAAATCCGCGGCACTCCCTGATTCGCGCCGAATCCTGTGGGCGCGGGCGGGCCCGCGACGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGga                                                                                                                              <  1:5231850/149‑1 (MQ=37)
                    aCCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGga                                                                                                                              <  2:3127451/150‑1 (MQ=255)
                      cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGgaga                                                                                                                            <  1:1956451/150‑1 (MQ=255)
                      cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGgaga                                                                                                                            >  2:2992041/1‑150 (MQ=255)
                       tGGAAATCAGCTGCTCGTCCGGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAGGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGAt                                                                                                                           <  2:5101586/150‑1 (MQ=255)
                         gAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGa                                                                                                                         <  1:4112932/150‑1 (MQ=255)
                             tCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATg                                                                                                                     >  1:2038542/1‑150 (MQ=255)
                             tCAGCTGCTCTTACTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATTGAATGCACCGGCTACGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGAGAACACAAAACCGGAGAAGAAATg                                                                                                                     >  2:1521534/1‑150 (MQ=25)
                              cAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATga                                                                                                                    <  1:1702657/150‑1 (MQ=255)
                                  tgctCTTCCTGCTTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccga                                                                                                                <  1:4406155/150‑1 (MQ=255)
                                  tgctCTTCCTGATTAGCGCCGCAGCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccga                                                                                                                <  2:3619357/150‑1 (MQ=255)
                                       ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCGTCGCCGGTGTTCGCGGGCCCGCCCGCACCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                                                                                                           >  1:501236/1‑150 (MQ=255)
                                           tGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGt                                                                                                       >  1:5409146/1‑150 (MQ=255)
                                             aTTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTaa                                                                                                     >  2:4266676/1‑150 (MQ=255)
                                                   gcCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTTCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGGTCCCCCAAGGACACCGTGAACCCAACACCGGAGTTGAAATGACCGACCCACTGGTAATCCCCt                                                                                               >  1:1028408/1‑150 (MQ=37)
                                                           cTGTGGGAGCGGGCGTGCCCGCGACGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCAc                                                                                       <  1:4900409/150‑1 (MQ=255)
                                                            TGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCCGCTTCACCGGTGTTCGCGGGCACCCCCCCTCCCACAAGGAAACCGTGAAACCAACACCGGAGATGAAAAGAACGACCCACTGGTAAACCCCAGCCCCCaca                                                                                      <  1:3894195‑M1/150‑2 (MQ=255)
                                                            TGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACCTGATGGATTGCACCGGCTTCACCGGTGTTCGCGGGCCCGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAAACCCCAGCCCCCaca                                                                                      <  1:3411472‑M1/150‑2 (MQ=255)
                                                              TGGGAGCGGGCGTGCCCGCGAAGCCGGCCACGTGATGGATTGCCCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGTTGACATGACCGACCCACTGGTAATCCCCTGCCCCCCCTGc                                                                                    >  1:5112943‑M1/1‑150 (MQ=255)
                                                              TGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGc                                                                                    <  2:405503‑M1/150‑1 (MQ=255)
                                                              TGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCCTGAACCCAACACCGGAGATGAAATGAACGACCCACTGGTAATCCCCAGCCCccacagc                                                                                    <  1:4599806‑M1/150‑4 (MQ=255)
                                                                   GCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACgg                                                                               >  1:3647524‑M1/1‑150 (MQ=255)
                                                                    CGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGc                                                                              >  2:2038944‑M1/1‑150 (MQ=255)
                                                                         gtgcccgcgaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAAGCCCCTGCCCCCACTGCAACGGCCTCaa                                                                         >  1:66160‑M2/73‑150 (MQ=255)
                                                                         GTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCaa                                                                         >  2:799031‑M1/1‑150 (MQ=255)
                                                                            cccgcgaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCg                                                                      >  2:4805529‑M2/70‑150 (MQ=255)
                                                                            CCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCg                                                                      <  2:2517958‑M1/150‑1 (MQ=255)
                                                                             ccgcgaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGc                                                                     >  1:3485800‑M2/69‑150 (MQ=255)
                                                                             CCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGc                                                                                             >  2:3872013‑M1/1‑126 (MQ=255)
                                                                             CCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGc                                                                     <  2:1390300‑M1/150‑1 (MQ=255)
                                                                             CCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGc                                                                     <  1:42609‑M1/150‑1 (MQ=255)
                                                                              CGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGcc                                                                    >  2:4037697‑M1/1‑150 (MQ=255)
                                                                              CGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGcc                                                                    <  2:1974867‑M1/150‑1 (MQ=255)
                                                                              CGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGcc                                                                    <  1:4952321‑M1/150‑1 (MQ=255)
                                                                               gcgaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCt                                                                   >  1:766504‑M2/67‑150 (MQ=255)
                                                                                cgaacaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTg                                                                  >  2:1112039‑M2/66‑150 (MQ=255)
                                                                                 GAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGc                                                                 <  2:2845039‑M1/150‑1 (MQ=255)
                                                                                 GAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGc                                                                 <  2:571480‑M1/150‑1 (MQ=255)
                                                                                 GAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGc                                                                 <  2:1192957‑M1/150‑1 (MQ=255)
                                                                                 GAAGCAGGCAACGGGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGc                                                                 >  1:3071233‑M1/1‑150 (MQ=255)
                                                                                          aaCGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAgc                                                        >  1:4774588/1‑150 (MQ=255)
                                                                                          aaCGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAgc                                                        >  1:2710010/1‑150 (MQ=255)
                                                                                              tGATGGATTGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCt                                                    <  2:735068/150‑1 (MQ=255)
                                                                                               gagggATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCGGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTg                                                   <  2:2254832/147‑1 (MQ=255)
                                                                                               gATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTg                                                   >  1:738601/1‑150 (MQ=255)
                                                                                                aTGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTgg                                                  >  1:5585636/1‑150 (MQ=255)
                                                                                                 tGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTggg                                                 >  1:2001969/1‑150 (MQ=255)
                                                                                                 tGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTggg                                                 >  1:1945959/1‑150 (MQ=255)
                                                                                                 ccgcgaacACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTggg                                                 >  2:5409583/8‑150 (MQ=255)
                                                                                                  cgcgaacACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCTCTGCCCCCACTGCAAAGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGc                                                >  1:7677/7‑150 (MQ=255)
                                                                                                    aTTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGa                                              <  2:893580/150‑1 (MQ=255)
                                                                                                     ttGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCAAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGAt                                             >  1:2299797/1‑150 (MQ=255)
                                                                                                       atccatcacgttgcctgcttcgcgggcacgcccgctcccacaAGGAAACCGTGACCCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgc                                           >  2:5555078‑M2/43‑150 (MQ=255)
                                                                                                       acACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgc                                           >  2:2337116/2‑150 (MQ=255)
                                                                                                        cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCGCTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGc                                                >  1:3260765/1‑144 (MQ=255)
                                                                                                        cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgcg                                          >  1:629483/1‑150 (MQ=255)
                                                                                                         aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccgac                                                                                                               <  2:4198221/80‑1 (MQ=255)
                                                                                                          ccGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGcc                                        >  2:1129756/1‑150 (MQ=255)
                                                                                                          catcacgttgcctgcttcgcgggcacgcccgctcccacaGGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGcc                                        >  1:801825‑M2/40‑150 (MQ=255)
                                                                                                           cGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCg                                       >  2:2148061/1‑150 (MQ=255)
                                                                                                               ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAAt                                   >  1:5174518/1‑150 (MQ=255)
                                                                                                                  gCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCg                                <  1:223977/150‑1 (MQ=255)
                                                                                                                    cGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGt                              >  2:1786406/1‑150 (MQ=255)
                                                                                                                        gtTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCt                          <  1:2148061/150‑1 (MQ=255)
                                                                                                                          tcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGc                        >  2:2524969‑M2/24‑150 (MQ=255)
                                                                                                                          tcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGc                        <  1:405366‑M2/127‑1 (MQ=255)
                                                                                                                             cgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATg                                  <  2:1638651‑M2/117‑1 (MQ=255)
                                                                                                                             cgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATg                                  >  1:1638651‑M2/21‑137 (MQ=255)
                                                                                                                               ggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCaaaaa                   <  1:277290‑M2/132‑1 (MQ=255)
                                                                                                                                  acgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGa                <  2:1379052‑M2/135‑1 (MQ=255)
                                                                                                                                  acgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGa                <  2:4708383‑M2/135‑1 (MQ=255)
                                                                                                                                   cgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAt               <  2:1335854‑M2/136‑1 (MQ=255)
                                                                                                                                   cgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAt               <  2:1918512‑M2/136‑1 (MQ=255)
                                                                                                                                    gcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAtg              >  1:504004‑M2/14‑150 (MQ=255)
                                                                                                                                    gcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAtg              >  2:2703657‑M2/14‑150 (MQ=255)
                                                                                                                                     cccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAtgt             <  1:1135563‑M2/138‑1 (MQ=255)
                                                                                                                                     cccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAtgt             <  2:503904‑M2/138‑1 (MQ=255)
                                                                                                                                     cccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAtgt             <  2:504008‑M2/138‑1 (MQ=255)
                                                                                                                                      ccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGAtgtg            <  1:2324220‑M2/139‑1 (MQ=255)
                                                                                                                                       cgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGc           <  1:422787‑M2/140‑1 (MQ=255)
                                                                                                                                           cccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGtt       <  1:1882‑M2/144‑1 (MQ=255)
                                                                                                                                            ccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTg      >  1:4730504‑M2/6‑150 (MQ=255)
                                                                                                                                            ccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTg      >  1:5445593‑M2/6‑150 (MQ=255)
                                                                                                                                            ccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTg      >  2:2073895‑M2/6‑150 (MQ=255)
                                                                                                                                             cacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGa     <  1:1069063‑M2/146‑1 (MQ=255)
                                                                                                                                             cacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGa     <  2:3235125‑M2/146‑1 (MQ=255)
                                                                                                                                              acaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAg    >  1:4487016‑M2/4‑150 (MQ=255)
                                                                                                                                              acaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAg    >  1:846528‑M2/4‑150 (MQ=255)
                                                                                                                                               caAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGc   >  2:49959‑M2/3‑150 (MQ=255)
                                                                                                                                               caAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGc   >  1:1920098‑M2/3‑150 (MQ=255)
                                                                                                                                                aAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCa  >  1:4672167‑M2/2‑150 (MQ=255)
                                                                                                                                                aAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCa  <  2:3310418‑M2/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
ACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCA  >  NC_002947/5791417‑5791710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.