| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,882,142 | A→G | 6.2% | T80A (ACC→GCC) ‡ | PP_3425 → | RND family transporter MFP subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,882,142 | 0 | A | G | 6.2% | 815.1 / 27.0 | 257 | T80A (ACC→GCC) ‡ | PP_3425 | RND family transporter MFP subunit |
| Reads supporting (aligned to +/- strand): ref base A (113/128); new base G (9/7); total (122/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.12e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
TGCAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGC > NC_002947/3881993‑3882291 | tGCAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCa > 2:450542/1‑150 (MQ=255) cAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCAcc > 2:5155611/1‑150 (MQ=255) gCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGaa < 1:879777/150‑1 (MQ=255) tCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAgg > 1:4262336/1‑150 (MQ=255) ccGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCGGTGAAGgcg < 1:4930281/150‑1 (MQ=255) ccGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGgcg < 1:2633257/150‑1 (MQ=255) cGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGgcgc < 1:1693730/150‑1 (MQ=255) gCTGCGCCGTAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGACACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGACGgcgac < 2:4184115/150‑3 (MQ=255) tGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCa < 2:4424793/150‑1 (MQ=255) tGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCa > 1:1999907/1‑150 (MQ=255) tGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCa < 1:1242884/150‑1 (MQ=255) gcgcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAg < 2:2925755/150‑1 (MQ=255) gcgcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGGCGCCTTCGGTGAAGGCGacctg < 2:5605036/150‑3 (MQ=255) ccGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTc < 1:3240358/150‑1 (MQ=255) gAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCaa < 1:1222643/150‑1 (MQ=255) gAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCaa > 2:2320780/1‑150 (MQ=255) gAAGGTAAGTGGGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCaa < 2:4321856/150‑1 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg < 2:1677697/150‑1 (MQ=255) aaGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAgg < 2:4829482/150‑1 (MQ=255) gtgGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGAc > 2:1789456/1‑150 (MQ=255) gCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctg > 2:4091270/1‑150 (MQ=255) cAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctgct < 1:903472/150‑1 (MQ=255) cAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctgct < 2:2872463/150‑1 (MQ=255) aaGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctgctg > 1:3783485/1‑150 (MQ=255) ggTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGtt > 2:4538576/1‑150 (MQ=255) ggTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGtg > 1:4542266/1‑149 (MQ=255) gTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTc < 2:5038082/150‑1 (MQ=255) gTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTc < 2:5396586/150‑1 (MQ=255) tGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTcc < 2:3253660/150‑1 (MQ=255) tGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTcc < 2:4030450/150‑1 (MQ=255) tGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTcc < 1:1042487/150‑1 (MQ=255) gATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCa < 2:2611736/150‑1 (MQ=255) aTCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGTCGCCCAGGTCAAGAAATGCGACCTGCTGTTCAAg > 1:4199703/1‑150 (MQ=255) aTCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAg > 2:3803188/1‑150 (MQ=255) aTCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGACCAGGTCAAGAAAGGCGACCTGCTGTTCCAg > 1:1204441/1‑150 (MQ=255) tCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGa < 2:1011897/150‑1 (MQ=255) gAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATc > 1:3385412/1‑150 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCg > 1:5184910/1‑150 (MQ=255) caacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAc < 2:553012/150‑1 (MQ=255) caacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAc < 1:2724770/150‑1 (MQ=255) aacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCa < 2:4657303/115‑1 (MQ=255) aacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCa > 1:4657303/1‑115 (MQ=255) aacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAcc > 1:3333095/1‑150 (MQ=255) tCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGcc < 1:2445661/150‑1 (MQ=255) gAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTc < 2:1345644/150‑1 (MQ=255) tGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAg < 1:2051048/150‑1 (MQ=255) gggACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGCCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAgg < 2:2828412/150‑1 (MQ=255) gAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGaa < 2:3208771/150‑1 (MQ=255) gAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGaa < 2:4660263/150‑1 (MQ=255) ttCACCGGCCGGCTCGTAGGCCCGGTAACCGTCGTTGTGCGCCCGGGGGTCTCCGGCCAGATCGACCTGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTc < 2:640453/150‑1 (MQ=255) ttCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTc > 2:819994/1‑150 (MQ=255) ttCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTc > 1:4333860/1‑150 (MQ=255) tCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTcc < 1:1602799/150‑1 (MQ=255) tCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTcc > 1:1708830/1‑150 (MQ=255) tCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTcc < 1:2347665/150‑1 (MQ=255) cACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTACACCGAAGGCGCCCAGGTCAAGAAAGGCGACCAGCAGTACCAGAAAGACCCCCCCCCCTACAAGGCAGAAgacaa > 1:640453/1‑146 (MQ=255) aCCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTccgc > 1:5107117/1‑150 (MQ=255) ccgccTCGCAGCCCCGGAATCCGTCGAAGTGCGCCCGCGGGTCTGCGGGCAGATCGACCATGTCGGCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAGGCGCGGCCTTTCCTTGCTGAAGTCCGCCGCCt < 2:4725041/150‑1 (MQ=255) ccgccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCt < 2:1009364/150‑1 (MQ=255) cgccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTc > 1:1900192/1‑150 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg < 1:980629/150‑1 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg < 1:2311550/150‑1 (MQ=255) cGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCGAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGc < 2:868693/150‑1 (MQ=255) cGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGc > 2:3430246/1‑150 (MQ=255) gAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCTGGGCGCCTTCGGTGAAGGCGACCTGGt > 1:4995369/1‑71 (MQ=18) aaCCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACa < 1:5575164/150‑1 (MQ=255) aaCCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACa < 1:5447497/150‑1 (MQ=255) aCCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACag > 2:5592126/1‑150 (MQ=255) aCCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACag > 2:3556502/1‑150 (MQ=255) ccGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACagg < 1:1402236/150‑1 (MQ=255) gTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggcc > 2:712936/1‑150 (MQ=255) tCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggcca > 1:2917318/1‑150 (MQ=255) gAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaag < 2:1889934/150‑1 (MQ=255) aaGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaagg > 1:4392450/1‑150 (MQ=255) gTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaaggcc > 1:87240/1‑150 (MQ=255) gcgcCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCAc < 1:1538082/150‑1 (MQ=255) cgcCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCAcc > 1:25326/1‑150 (MQ=255) cccGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGc > 1:4823401/1‑150 (MQ=255) ccGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAgcg < 1:3596344/150‑1 (MQ=255) ccAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCaa < 2:2794626/150‑1 (MQ=255) cAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAAc < 2:1203547/150‑1 (MQ=255) gATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGa > 1:2816075/1‑150 (MQ=255) gATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGa > 2:2520149/1‑150 (MQ=255) cGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGc > 1:3996731/1‑150 (MQ=255) gACCTGGGCGCCTTCGGTGAAGGCGACCTGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGcc > 1:4784305/1‑150 (MQ=255) gACCTGGGCGCCTTCGGTGAAGGCGACCTGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGcc > 2:2170318/1‑150 (MQ=255) gACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGcc > 1:3492148/1‑150 (MQ=255) aCCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGccc > 1:1764875/1‑150 (MQ=255) aCCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCACCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGccc < 2:750449/150‑1 (MQ=255) cAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgc < 2:961342/150‑1 (MQ=255) aGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgcc > 1:3281798/1‑150 (MQ=255) ggTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgccg > 1:3662735/1‑150 (MQ=255) ggcGCCTTCGGTGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGt > 1:2914/3‑150 (MQ=255) tCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCa > 2:4705168/1‑129 (MQ=255) tCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCa < 1:4705168/129‑1 (MQ=255) gCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGc < 2:1488550/150‑1 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTTCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGACGCCCGCCGTGGCGa < 2:4985320/150‑1 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGa < 2:3335872/150‑1 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGa > 2:2206286/1‑150 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCAACGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGa > 1:3152758/1‑150 (MQ=255) | TGCAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGC > NC_002947/3881993‑3882291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |