| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,934,791 | A→T | 9.1% | intergenic (+21/+17) | PP_3464 → / ← PP_5603 | hypothetical protein/FAD dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,934,791 | 0 | A | T | 9.1% | 433.2 / 22.9 | 143 | intergenic (+21/+17) | PP_3464/PP_5603 | hypothetical protein/FAD dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (89/40); new base T (2/11); total (91/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
GACCACCTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCT > NC_002947/3934642‑3934938 | gACCACCTGCTGATCATCCCGGTGGTTGGTTACTACAAGCCGGAGCGCACTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTATTTCTGATCCGACATCCTCGGGCT‑GCGa > 2:4969530/1‑150 (MQ=255) accaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGaa < 1:594400/150‑1 (MQ=255) ccaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAag > 1:2047203/1‑150 (MQ=255) ccaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAag < 2:396340/150‑1 (MQ=255) caccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAagc < 1:4204544/150‑1 (MQ=255) caccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCCGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAcgc > 2:5486153/1‑150 (MQ=255) accTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAagca < 2:3639056/150‑1 (MQ=255) accTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAagca < 1:4070907/150‑1 (MQ=255) accTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAagca < 2:1772139/150‑1 (MQ=255) accTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAagca < 2:2718397/150‑1 (MQ=255) ccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAagcag > 2:5010117/1‑150 (MQ=255) gctgATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGccc > 2:84452/1‑150 (MQ=255) ctgATCCGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGGTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGTT‑T‑GTCGGGTCCTTTTTCTGATCCGACATCCTGGGGCT‑GCTTCGCAGcccc < 1:3931060/150‑1 (MQ=255) ctgATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCTTCGCAGcccc < 2:2884696/150‑1 (MQ=255) ctgATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCTTCGCAGcccc < 1:3931122/150‑1 (MQ=255) taTCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGTCCAA‑TAGTTGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCTTCGCAGccccag < 2:3197151/149‑3 (MQ=255) gATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCATTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGTATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCTTCGCAGccccag < 2:1422134/150‑3 (MQ=255) ctgaGCCGGGGGGTGGGTTTCTACTAGCGGGTGCGCAGGGCGGCCAA‑TTGGGGTCCGCAGCTGGGTGGGGGGGATCCCGGGAGTTACCTGCAATTGAG‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGGT‑GCGCCGCAGCCCCGGc < 2:4193266/147‑1 (MQ=255) ccGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAAtctc > 1:224291/1‑150 (MQ=255) ggtgttGGGTTTCTACCCGCCGGAGCGCTGTGCGGCCAA‑TTGTGGTACGCTGGTGGGTGGGCGGTATACGGGGACTTACCCGCAATTGTT‑T‑GTCGGGACGTTTTTCTGAGCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCaa < 2:4152595/150‑1 (MQ=255) tgttttCTACACGCCGGAGCGCTGTGCGGCCAA‑TTGTGTTACGCTGCTGGGTGGGGGGGATACGGGGACTTACCTGCATTTTAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAaaccaac < 2:1745820/147‑1 (MQ=255) tCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTg > 1:340080/1‑150 (MQ=255) cTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGc > 1:1881131/1‑150 (MQ=255) tACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGcg > 2:3749758/1‑149 (MQ=255) tACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCt > 1:961369/1‑150 (MQ=255) cacgCCGGAGGGCTGGGGGGCCAA‑TTGTGGTCCGCTGGTGGGGGGGGGGTATCCGGGTACTTCCGTGAAATTTTT‑T‑GTGGGGAGCTTTTTCTTTTCCGAAAGCTTGGGGCT‑GCTAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTcc < 2:1677796/147‑1 (MQ=255) cAAGCCGGAGCGCAGTACGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTcc > 1:4169705/1‑150 (MQ=255) aaGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTccc > 1:3661478/1‑150 (MQ=255) cgggcgcgcAGTG‑GGCCAATTGGTGGTCCCCTGGGGGGTGGGCGGTAT‑CCGGGTATTAACATCCATTGTTGT‑GTGGGGACCTTTTTCTGACCCTACATCCTGGGGCT‑GCTACGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCa < 2:5306697/145‑1 (MQ=255) cAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCAccgc > 2:919481/1‑150 (MQ=255) aGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCAccgcc > 2:3148020/1‑150 (MQ=255) gTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCAccgccg > 2:5078090/1‑150 (MQ=255) gCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGc > 2:3151712/1‑150 (MQ=255) ccAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGct > 1:823430/1‑150 (MQ=255) aa‑TAGTGGTACGCAGCTGGGTGGTCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGctcc > 1:3366063/1‑150 (MQ=255) tgTGGTCCGCTGGTGGGTGGGCGGGACACCGGGACTGACCTGCAATTGTT‑T‑GTCGGGACGTTGTTGTGATCGGACATCCTGGGGCT‑GCGATGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCctct < 2:5107029/149‑1 (MQ=255) tgttACGCCGGTGGGGGGGGGGGATCCGGGTACTTACCTGAATTTTTT‑T‑GTGGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCTAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTctgc < 2:2636902/147‑1 (MQ=255) aGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCAcc > 2:2481710/1‑150 (MQ=255) gtggggtgggCTGTATACCGTTACATCACTGAATTTTTT‑G‑GTCGGTACTTTTTTTTTAACCTACATCCTGGGGGT‑GGTAATCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCATCCACCGCCGCACGCTCCTCTGCTGTTCAccc < 2:1233824/147‑1 (MQ=255) ggtggtggggCGTGATCCGGGTACTAACCGGCATTTTTT‑T‑GTCGGTACCTTTTTCTTAACCCAATCCCTGGGGCT‑GCGAAGCACCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCAccc < 2:563886/143‑1 (MQ=255) gCTGGGTGGGGGGGACCCCGGGACTTACCT‑CCATTGTT‑TGGGCGGGCCCTTTCTCTGACCCGACAGCCTGGGGCT‑GCGAAGCCCCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCAccc < 2:3897244/150‑1 (MQ=255) gtgggCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCACACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAg > 1:5012583/1‑150 (MQ=255) gtgggtaTACCGGGAGTTACCGGCAATTGAT‑T‑GGGGGGACATTTTTCTGAGCCGAAATCCGGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGccc < 2:3366063/144‑1 (MQ=255) ggCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGccc > 2:1567757/1‑150 (MQ=255) ggATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGAc > 2:4033777/1‑150 (MQ=255) cGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATAcc > 2:2845532/1‑150 (MQ=255) cGGGACTTACCTGCAATTGAT‑T‑GTCGGGACC‑TTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCg > 1:2020298/1‑150 (MQ=255) gACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGcc > 2:3257518/1‑150 (MQ=255) aCTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCt > 2:2141547/1‑150 (MQ=255) ttACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCa > 1:2757934/1‑150 (MQ=255) ttACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCa > 1:4938230/1‑150 (MQ=255) tACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCaa > 1:2523623/1‑150 (MQ=255) aCCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAAc > 2:3773184/1‑150 (MQ=255) ccTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACa > 1:3182661/1‑150 (MQ=255) ccTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACa > 2:759989/1‑150 (MQ=255) cTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAg > 1:357028/1‑150 (MQ=255) tGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAgg > 2:909351/1‑150 (MQ=255) tGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAgg > 2:564878/1‑150 (MQ=255) gCATTTGTT‑T‑GTGGGTACATTTTTCTTATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGgc < 2:1602529/150‑1 (MQ=255) cAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGgcc > 2:5599666/1‑150 (MQ=255) cAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGgcc > 1:1388582/1‑150 (MQ=255) aaTTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGgccg > 1:247516/1‑150 (MQ=255) tttttt‑t‑gTGGGGACCTTTTTGTTTCCCGACAGCGGGGGGCG‑GCGACGCCGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGgccgc < 1:2956117/145‑1 (MQ=255) t‑t‑gTGGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCTCCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACt > 2:1909918/1‑150 (MQ=255) tCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCg > 1:2263249/1‑150 (MQ=255) tCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCg > 1:1810289/1‑150 (MQ=255) tCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCg > 1:5611040/1‑150 (MQ=255) gggACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTa > 1:1274298/1‑150 (MQ=255) ggACCTTTTTCTTATCCTACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTAt < 2:4722981/150‑1 (MQ=255) ggACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTAt > 1:2673300/1‑150 (MQ=255) acttttttCTTTTCCGA‑ATTGTGGGGGTGGCGACGCACCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTAttt < 1:4358783/147‑1 (MQ=255) aCCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTAttt > 2:260035/1‑150 (MQ=255) tttCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGc > 1:1359515/1‑150 (MQ=255) tttCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGc > 1:1472404/1‑150 (MQ=255) tttCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGc > 1:4594897/1‑150 (MQ=255) tttCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGc > 1:4594313/1‑150 (MQ=255) cTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGcacc > 1:5287979/1‑150 (MQ=255) cTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGcacc > 2:4615050/1‑150 (MQ=255) gATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGcaccac > 1:4894821/1‑150 (MQ=255) ccccGACACCCCGGGGCC‑GCGAACCACCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAAGACCGCCTCAACAGGCCGCCCACTTCGTATTTGTCGCaccacc < 2:4750381/148‑1 (MQ=255) aTCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCaccacc > 1:1195155/1‑150 (MQ=255) ccGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCgg > 1:3491884/1‑150 (MQ=255) cGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGgc > 1:2033329/1‑150 (MQ=255) aCATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGgcgc < 2:3621931/150‑1 (MQ=255) tCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAg > 2:1077574/1‑150 (MQ=255) tCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAg > 2:1318995/1‑150 (MQ=255) tCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCGCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAg > 1:3280471/1‑150 (MQ=255) ccTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGt > 1:5318313/1‑150 (MQ=255) ccTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGt > 1:3082437/1‑150 (MQ=255) ccTGGGCCT‑CCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGACACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCCACAATACCGCCACAACAGGCCGCCCACTGACTATATGTAGCACCACCGCCGCCAga > 2:4347290/1‑149 (MQ=255) ggCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTc < 2:211508/128‑1 (MQ=255) ggCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTc > 1:211508/1‑128 (MQ=255) ggCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCAc > 1:4201406/1‑150 (MQ=255) t‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCAcccc > 2:4121831/1‑150 (MQ=255) t‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCAcccc > 2:5492674/1‑150 (MQ=255) gCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCAccccc < 2:1881131/150‑1 (MQ=255) gCGAAGCAGCCCCGGCAATATCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCAccccc < 1:5119400/150‑1 (MQ=255) cGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCt > 2:4205826/1‑150 (MQ=255) aaGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAg < 1:4090218/137‑1 (MQ=255) aaGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAg > 2:4090218/1‑137 (MQ=255) | GACCACCTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAA‑TAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGAT‑T‑GTCGGGACCTTTTTCTGATCCGACATCCTGGGGCT‑GCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCT > NC_002947/3934642‑3934938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |