| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,078,602 | G→A | 9.9% | intergenic (‑147/+477) | mdtA ← / ← PP_3586 | multidrug transporter membrane fusion protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,078,602 | 0 | G | A | 9.9% | 578.8 / 39.8 | 202 | intergenic (‑147/+477) | mdtA/PP_3586 | multidrug transporter membrane fusion protein/transposase |
| Reads supporting (aligned to +/- strand): ref base G (104/78); new base A (11/9); total (115/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 204 total aligned reads displayed.
GTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGT > NC_002947/4078458‑4078751 | gTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTc < 2:534666/150‑1 (MQ=255)gTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTc > 1:433936/1‑150 (MQ=255) gaacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATACGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCgg < 2:4534594/150‑1 (MQ=255) gaacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCgg < 2:754166/150‑1 (MQ=255) gaacgaacCGTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCgg < 2:4529391/150‑1 (MQ=255) aacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCggg < 1:1591766/150‑1 (MQ=255) aacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCggg < 2:2895504/150‑1 (MQ=255) acgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGc > 1:1119696/1‑150 (MQ=255) cgaccCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGcc < 2:1404744/150‑1 (MQ=255) cgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGcc < 2:5449396/150‑1 (MQ=255) gacccTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGCCg < 2:3379391/147‑1 (MQ=255) gaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCg > 1:5428260/1‑150 (MQ=255) gaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTAACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGTCCGGAACGTGTTCCGGGCCg > 2:439869/1‑150 (MQ=255) aacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGt > 2:4710401/1‑150 (MQ=255) acCTTTTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTACCAAAGGGCATTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGCCGtt < 1:5554479/150‑1 (MQ=255) acCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGtt > 1:2520810/1‑150 (MQ=255) ggtgcGGAATGCCGACTTGAGGAGGAGGAACGATAAGCACGGCCCTCGTTTGAGCAAAGGGCCTTTACCCGAGGTGTACCTTTGCCTGACGGGGCCAAGAGGCGGAATTTTAAATGACCACGGCCCGGAACGTGTTCCGGGCCGTTACAg < 2:161887/146‑1 (MQ=255) gTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAgg < 2:3743400/150‑1 (MQ=255) ttCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAggg > 1:8758/1‑150 (MQ=255) tCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGgt > 2:1826746/1‑150 (MQ=255) ggAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGgtgt > 2:4257249/1‑150 (MQ=255) aaTGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTg < 2:163590/150‑1 (MQ=255) gacgacTTGAGGAGGATGAACGATAAGCACTGCCATCTTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCtt < 2:3318109/150‑1 (MQ=255) acgacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTg < 1:1826746/150‑1 (MQ=255) gacTTTCGGAGGATGAACTATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa < 1:2952725/150‑1 (MQ=255) ttGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCg < 2:200492/150‑1 (MQ=255) gaggagGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGt > 1:3001577/1‑150 (MQ=255) gaggagGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGt < 2:3441775/150‑1 (MQ=255) gaggagGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGt < 2:3247540/150‑1 (MQ=255) gaggaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCATTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGATGCTTGGAGCGGTGGc > 1:1204349/1‑150 (MQ=255) aggaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCg < 2:3690304/150‑1 (MQ=255) ggaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACATTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTACGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCgg > 1:4534327/1‑150 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCGTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCggg > 2:2478841/1‑150 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTg > 1:3336009/1‑145 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCggg > 2:4024506/1‑150 (MQ=255) tGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGcc > 2:4966846/1‑150 (MQ=255) gAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCt > 2:1544039/1‑150 (MQ=255) gAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCt > 1:552581/1‑150 (MQ=255) aCGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCGTGGAGCGGTGGCGGGCCTGa > 1:3843227/1‑150 (MQ=255) cGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGaa < 1:1829825/150‑1 (MQ=255) gATAAGCACTGCCATCGTTTTAGCCAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGATCGTGTTCCGGGCCGTTCCAGGGTGTTGCTTGGAGCGGGGGCGGGCCTGAAg > 2:5577035/1‑150 (MQ=255) aTAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAgg > 1:2017326/1‑150 (MQ=255) aaGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGtt > 2:2523822/1‑150 (MQ=255) aGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTc < 1:4194322/150‑1 (MQ=255) gCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGCAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGc < 1:665501/150‑1 (MQ=255) aTCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTg > 1:3168537/1‑150 (MQ=255) ttttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCt > 1:2137920/1‑150 (MQ=255) tttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGCGGCGTAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTg < 1:4794656/150‑1 (MQ=255) ttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTgg < 2:2079771/150‑1 (MQ=255) aGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGcc > 1:214236/1‑150 (MQ=255) gCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGccc > 1:2175618/1‑150 (MQ=255) aaaGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCtt > 2:1440310/1‑150 (MQ=255) aaGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCttt > 1:4848/1‑150 (MQ=255) aaGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCttt > 1:4750/1‑150 (MQ=255) gggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGGTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcg > 2:537763/1‑150 (MQ=255) ggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcgc > 1:1356177/1‑150 (MQ=255) ggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcgc > 1:3804185/1‑150 (MQ=255) cTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCggg > 1:806347/1‑150 (MQ=255) cTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCggg > 2:1145410/1‑150 (MQ=255) tttACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGt > 2:2183732/1‑150 (MQ=255) ttACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAATGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCt > 1:126339/1‑129 (MQ=255) cAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAcc < 1:3957764/150‑1 (MQ=255) cAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAcc > 2:3820380/1‑150 (MQ=255) cgagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc < 1:3638723/149‑1 (MQ=255) agagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc < 2:1269009/150‑1 (MQ=255) agagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc < 1:9675/150‑1 (MQ=255) gagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCg > 2:3045977/1‑150 (MQ=255) cggTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGc < 1:1011736/149‑1 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCtt > 2:3934286/1‑150 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCtt > 1:4064327/1‑150 (MQ=255) tACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTa < 2:2454015/150‑1 (MQ=255) cTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATca > 2:125073/1‑150 (MQ=255) cTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATca > 2:5400490/1‑150 (MQ=255) cTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATca > 1:3240761/1‑150 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGcc > 2:2714226/1‑122 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGcc < 1:2714226/122‑1 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcgc > 1:4639012/1‑129 (MQ=255) tGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACaaaa < 2:190917/150‑1 (MQ=255) cAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTCCCGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCa > 2:4774641/1‑150 (MQ=255) cAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACACAAGATAACCCa > 2:548658/1‑150 (MQ=255) aaGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCAc > 1:857528/1‑150 (MQ=255) gCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttc > 2:5082413/1‑150 (MQ=255) ggAATTTTAAATGAACACGGCCCGGAACGTGTTCCGGGCCGTTAGAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctt < 2:3774936/150‑1 (MQ=255) ggAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctt > 1:168327/1‑150 (MQ=255) ggAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctt > 1:3789481/1‑150 (MQ=255) ggAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctt < 1:5084345/150‑1 (MQ=255) gAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttcttt < 1:2335003/150‑1 (MQ=255) ttttAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 2:4117775/150‑1 (MQ=255) ttttAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 1:5356856/150‑1 (MQ=255) tttAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg > 1:1801243/1‑150 (MQ=255) aaaTGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGa < 1:2461511/150‑1 (MQ=255) aaaTGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGATTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGa < 1:1362736/150‑1 (MQ=255) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACCgg > 1:189519/1‑150 (MQ=255) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAgg < 2:3365858/150‑1 (MQ=255) ggCCCGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAgg > 1:3713317/1‑150 (MQ=255) gCCCGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc > 1:5501546/1‑150 (MQ=255) cccGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcg > 2:3526113/1‑150 (MQ=255) ccGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgc > 1:309319/1‑150 (MQ=255) gAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGcgcgcg > 2:108983/1‑150 (MQ=255) gAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGcgcgcg > 2:3156642/1‑150 (MQ=255) | GTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGT > NC_002947/4078458‑4078751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |