| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,084,441 | A→T | 7.4% | intergenic (‑252/+132) | sdaC ← / ← amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,084,441 | 0 | A | T | 7.4% | 582.2 / 26.1 | 196 | intergenic (‑252/+132) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (78/98); new base T (10/5); total (90/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 201 total aligned reads displayed.
GTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAG > NC_002947/4084294‑4084589 | ttGGACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 1:3363951/150‑1 (MQ=255) tGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg < 2:3007816/150‑1 (MQ=255) cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCTTGCGGCGCGATAGGGCCGCAAAGCGGc > 2:326890/1‑150 (MQ=255) cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 2:4798307/150‑1 (MQ=255) cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 1:2513056/150‑1 (MQ=255) aCTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcc < 1:5019511/150‑1 (MQ=255) cTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGccc < 1:3316950/150‑1 (MQ=255) ttGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCGTCGCGCTAGGGCCGCAAAGCGGcccc > 2:274819/1‑150 (MQ=255) ttGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCCAAGCGGcccc > 2:3091188/1‑150 (MQ=255) tGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCa < 2:5244792/150‑1 (MQ=255) gCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCat < 2:2282641/150‑2 (MQ=255) gAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccctatcg < 2:3767038/150‑6 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCaa < 1:1721758/150‑1 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCACCaa > 2:4281254/1‑150 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCCGCaa > 2:584718/1‑150 (MQ=255) aGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGAACGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAt < 1:1276500/150‑1 (MQ=255) cTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa < 1:4111646/150‑1 (MQ=255) ttttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCCGCAAGTTAAg > 2:142596/1‑150 (MQ=39) cGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa < 1:148400/144‑1 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCCTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCCGCCCCCGCAATTTCAGCGGCaa > 2:4310174/1‑150 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccctat > 2:509317/1‑132 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCCGCCCATTCAGCGGCaa > 1:4193820/1‑150 (MQ=39) cGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGc < 2:4649721/150‑1 (MQ=255) gCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCg < 1:2851278/150‑1 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCATCGGCAAAGCTGCAATCGTa > 2:5501196/1‑150 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTa < 2:1785740/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAg < 2:2671704/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGGGGCGGGGGAGGGGCGCGAACCGGCCCCCCCAAGTAGAGCGGCAAAGCAGCaaaagtggg > 1:4609777/1‑143 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 2:4586458/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 1:2265825/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 1:2404240/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 2:1915707/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 1:1779189/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATTCAGCCGCCAAGCGGCAATCGGAgg > 2:2809999/1‑150 (MQ=38) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAACCGGCCCCAGCAATATAAGCGGCAAAGCGGCCAACGGAgg > 2:316800/1‑150 (MQ=38) tgacTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAggg < 1:4938128/147‑1 (MQ=255) cTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCCAAACGGCCCCCCCCAATTCAGCCCCAAACCTGCAAGCGTCGGGgcg > 1:4416773/1‑150 (MQ=255) tcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCG‑CCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCt > 1:2111226‑M1/70‑150 (MQ=255) ttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGAGATGGCCCCACAGCGGCCCCAGCAAGTTCAGCGGCAAAGCTGCAAACGGAGGGgcggg > 1:3155788/1‑148 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCCATCGTAGGGGCGCTcc > 2:4999209/1‑150 (MQ=255) aCAAGCGGAAGGCAGTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGCTAGGGCCGCAAAGCCGCCCCACCAATTTCAGCCGCCAAGCTGCAATCGTAGGGGCGCTcc > 2:168630/1‑150 (MQ=255) aGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCa < 1:519745/150‑1 (MQ=255) cGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAcc < 1:101649/150‑1 (MQ=255) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCt < 1:1425644/150‑1 (MQ=255) gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTc < 1:2027216/150‑1 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcgc < 1:3555008/150‑1 (MQ=255) aactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGa > 2:4131829‑M1/52‑150 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCGTTTAGCGAc > 2:1773544/1‑150 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGAc < 2:2519145/150‑1 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGAc < 2:2519122/150‑1 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGAc < 1:2385770/150‑1 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa < 2:4835786/150‑1 (MQ=255) gccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa > 1:2695775‑M1/47‑150 (MQ=255) tgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAg < 2:2591860/150‑1 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 1:3012773‑M1/45‑150 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGc < 1:876621/150‑1 (MQ=255) gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCg < 1:5491412/150‑1 (MQ=255) cGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGAAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCACGGCCGCTc < 2:1593995/150‑1 (MQ=255) gTGGAATGTTGCGGCCTGGGCGCCGGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAATGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATGGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTccc < 2:3987308/150‑1 (MQ=37) ttGTAGCGGCGGGGGCGCCTGGGGGGGGGCTTGTGGGTGCGGCCTTGCGTCGCGTTAGGGCCGCAACGGGGCCCCAGCATTTTCAGCGGCAAAGCTGCATTCTTGGGGGCGCTCCGCACCCTTTTCGCGACGAAAGGCCGCTCCCACaaa < 2:4298003/149‑1 (MQ=255) tgggcgcggcgTGGGCGCCTGGGGGGGGGCGTGGGGGCGCGGCGTTGCGGCGCGATTGGGCCGAAACGCGCCCCCAGCATTTTCCGCGGAAAAGCTGAAATCTTTGGGGCGCTCCGCACCATTTGCGCGAGGCAAGGCCGCTCCCACaaa < 2:1501290/145‑1 (MQ=255) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCGTTTCGCGACGCAAGGCCGCTCCCAACAAGTCCa > 2:1356295/1‑150 (MQ=255) gCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCACCAAATTAAGCGGCAAAGCTGCCATCGGAGGGGCGCGCCGCCCCCCTTTAGCGACGCCAGGCCCCACCCACAAAATCCaaac > 2:3400651/1‑148 (MQ=25) ccTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCGTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACcg > 2:4129142/1‑150 (MQ=255) tgtgGGGCGGCCTGTGGGAGCGGCCGTTCGTCGCGATACGGCCCCAAAACGGCCCCACCAAATTAACCCGCAAAGCAGCCAACGTTGGGGGGCTCCCCCCCCGTTTCGCGACGCAAGGCCGCGCCCACAAAGTCCAAACCCGCCCcccac > 2:2426223/1‑149 (MQ=255) gcggcCGGTGGGAGCGGCCTGGCGGCGCGAGCGGGCCGCAACGCGGCCCCAGCACTTCCCGCGGCAACGCTGCAATCGTCGGGGCGCTCCGCACCCTGTGCGCGCCGCAAGGCCGCTCCCACAAAGTCCACCCGCGCCCCACAGGAgggg < 2:3681727/150‑1 (MQ=25) ccTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAACCTGCCCTCGTAGGGGCGCTCCGCACCCGTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCCCGCCCCCCAGGAGGGGCCGc > 2:5456261/1‑150 (MQ=37) TGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCACCAATTTCCGCGGCAAAGCTGCAAGCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGtt > 2:3118999‑M1/1‑150 (MQ=255) GGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCttt > 2:5389816‑M1/1‑89 (MQ=255) GGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCttt < 1:5389816‑M1/89‑1 (MQ=255) GCGGCCTTGCGTCGCCATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAATGCTGCAATCGACGGGGCGCACCGCACCCTTTCCGCGACGCATGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGccc > 2:5299493‑M1/1‑150 (MQ=255) CCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTg < 1:1967440‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGTGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 2:771186‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCATCCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTtggg < 2:1174201‑M1/150‑2 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 2:1888535‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTGTCGCGACGCAAGGCCGCTCCCACACAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 2:4721949‑M1/150‑1 (MQ=255) GCGTCGCTATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 2:3088149‑M1/1‑150 (MQ=255) GCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa < 1:4388001‑M1/150‑1 (MQ=255) CGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAg < 2:2347333‑M1/150‑1 (MQ=255) CGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGAGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAg < 2:2804740‑M1/150‑1 (MQ=255) GTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGt < 1:4880189‑M1/150‑1 (MQ=255) TCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGtt < 2:908763‑M1/150‑1 (MQ=255) CGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACt < 1:5355628‑M1/150‑1 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 2:4971678/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:3861815/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:3736859/3‑150 (MQ=255) ggCCGCACCGCGGCCCCCGCAATTTCCGCGGCAACGCGGCACTCGGCGGGGCGCTCCGCCCCCTCCCCGCGACGCACGCCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa < 1:2732824/150‑1 (MQ=255) ggCCGCAACGCGGCCCCAGCAATTTCCGCGGAAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa < 2:3927344/150‑1 (MQ=255) ggCCGCAACGCGGCCCCAGCAATTTCAGCGGCAACGCTGCAATCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa < 2:314143/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCaa > 1:2560260/1‑98 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCaa < 2:2560260/98‑1 (MQ=255) gCCGCAACGCGGCCCCCGCAATTTCCGCGGCAAAGCTGAAAGGGTCGGGGCGCGCCGCACCCTTTGCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc < 2:4704147/150‑1 (MQ=255) gCCGCAAAGCGGCCCCAGCGATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc > 1:1550156/1‑150 (MQ=255) gCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGGAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGGCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc > 1:5138689/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 2:4470244/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 1:4639875/1‑150 (MQ=255) cGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg > 1:4052927/1‑150 (MQ=255) cGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg > 2:657394/1‑150 (MQ=255) aaaGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAg > 1:993770/1‑150 (MQ=255) aaaGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAg > 1:3107548/1‑150 (MQ=255) | GTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAG > NC_002947/4084294‑4084589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |