| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,141,753 | T→A | 5.7% | intergenic (+48/+22) | PP_3640 → / ← PP_3641 | AraC family transcriptional regulator/cytosine/purine/uracil/thiamine/allantoin permease family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,141,753 | 0 | T | A | 5.7% | 499.8 / 15.4 | 159 | intergenic (+48/+22) | PP_3640/PP_3641 | AraC family transcriptional regulator/cytosine/purine/uracil/thiamine/allantoin permease family protein |
| Reads supporting (aligned to +/- strand): ref base T (70/79); new base A (5/4); total (76/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.51e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GGGTATCAGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTC > NC_002947/4141604‑4141901 | ggTATCAGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCttt < 2:4706870/150‑1 (MQ=255) ggTATCAGTCGGTGGCCGCATTCACCAGGGAGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCttt < 1:3611203/150‑1 (MQ=255) gTATCAGTCGGTGGCCGCATTCACCAGGGCGTTCGCCTAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCTGTCTGCATGACGGGCGCGGGCATTCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTg < 2:354281/150‑1 (MQ=255) aTCAGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCa < 1:1564772/150‑1 (MQ=255) aGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGcc < 1:833004/150‑1 (MQ=255) aGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGcc < 2:2011333/150‑1 (MQ=255) aGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTTCAGcc > 1:318397/1‑150 (MQ=255) gTCGGTGGACGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGccc > 2:4525752/1‑150 (MQ=255) tCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCAAAGCAGcccc < 1:2731995/150‑1 (MQ=255) ggTGGCCGCATTCACCTGGGCGTTCGCCAAGGCTGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGGGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATTGTCGGGGCTGCAAAGCAGccccga < 1:4503601/150‑3 (MQ=255) gTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGGCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCTTAGTCGGGGCTGCAAAGCAGccccgac < 2:3660968/150‑4 (MQ=255) ggCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGtt < 2:4926764/150‑1 (MQ=255) ggCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGtt < 2:2238093/150‑1 (MQ=255) gCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTg < 2:1358853/150‑1 (MQ=255) ccGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCGGCGTTGCAGCCCCCAGTTgg > 1:70741/1‑149 (MQ=255) cGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCa < 1:243269/150‑1 (MQ=255) cGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCa < 1:5024322/150‑1 (MQ=255) cATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTTCAGCCCCAAGTTGCAGt > 1:5396666/1‑150 (MQ=255) aTTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCAGGTTGCAGtt > 2:4540318/1‑150 (MQ=255) ttCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGGGTTTGATCCCCAAGTTGGCGTTg > 1:2855252/1‑150 (MQ=255) aCCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCa > 2:3230007/1‑150 (MQ=255) aCCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCAAGTTGCAGTTGTCa > 1:3708184/1‑150 (MQ=255) ccAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAg > 2:5560975/1‑150 (MQ=255) ccAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCAAGTTGCAGTTGTCAg > 2:3589896/1‑150 (MQ=255) cAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGAAGCCCCAAGTTGCAGTTGTAAGt > 1:324476/1‑150 (MQ=255) aGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTc > 2:3240437/1‑150 (MQ=255) aGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTc < 2:2866787/150‑1 (MQ=255) ggCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAACATGACGGGCGCGGGAATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGt < 1:105294/150‑1 (MQ=255) cGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTg < 1:4189144/150‑1 (MQ=255) cGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCAGGTTGCCGTTGTCAGTCGTTg > 2:2441383/1‑150 (MQ=255) gTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGGCGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGa < 2:4792743/150‑1 (MQ=255) gCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCCTAGTCGGGGCTGCGTTGCAGCCCCAGGTGGCCGGTGTCAGTCGGTGACGcg > 2:3296738/1‑149 (MQ=255) gCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTGCAGCCCCAAGTTTCAGTTGTCAGTCGTTGTCGCt > 1:5427061/1‑150 (MQ=255) cAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGGTGCTTTTCAGCCCCCAGTTGCAGTTTTCAGTCGGTGAAGcagt > 1:1189451/1‑147 (MQ=255) cAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTTAAGCCCCAAGATTAAGGTGTCAAACGTTTACGCAGa > 1:4855748/1‑150 (MQ=255) gTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCcg > 2:2709178/1‑150 (MQ=255) tGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACTAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCcgc < 2:5559794/150‑1 (MQ=255) gggggTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCcgcg < 2:1190565/150‑1 (MQ=255) gggggTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCcgcg < 2:4099364/150‑1 (MQ=255) gggggTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCcgcg < 2:4098757/150‑1 (MQ=255) ggggTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTTCAGCCCCATTTTGCGGTTGTCAGTCGTTTACGCTGATAAACCgcgc > 1:379618/1‑150 (MQ=255) gTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCCCCCCCCAGTTGCAGTTGTCAGTCGTTGTCGCTGATAACCCgcgcccg > 2:2033852/1‑147 (MQ=255) tGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTg > 2:4185748/1‑150 (MQ=255) cAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTGCAGCCCCATGGTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACAGtt > 2:4010543/1‑150 (MQ=255) ccGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAAc < 2:5417127/150‑1 (MQ=255) gggggCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCGGCGTTTGAGCCCCCAGTTTCAGGTGTGAGTCGTTGTAGCGGATAAACCCCCCACAGTTaaacc > 1:4715601/1‑147 (MQ=255) gggCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTTCAGCCCCATGATGAAGTTGTCAGTCGTTGAAGCAGATAAAACCCCCACAGTTaaacccc > 1:3572432/1‑145 (MQ=255) gTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTGCAGCCCCAAGTTGCAGTTGTCAGTCGTTGTCGCGGATAACCCCCCCACAGTTAACCCCCATcc > 1:4470423/1‑150 (MQ=255) tATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTccc < 2:1927307/150‑1 (MQ=255) cGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCCAAGCGCGGACATCGACCAAGCGGCCCTAGTCGGGGCGGCGGTGCAGCCCCCGGGTGCCGGTGTCAGGCGGGGCCGCGGAGAACCCGCGCCCGGGGAACCGCCGGCCcgcg > 2:5302754/1‑150 (MQ=255) cGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACGGTTAACCGCCGTCCcgcg > 2:3755563/1‑150 (MQ=255) cGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCAAGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCcgcg > 2:3741255/1‑150 (MQ=255) gcaggcagCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCgt < 2:906856/150‑1 (MQ=255) gcaggcagCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCGGCGTTGCAGCCCCCAGGTGCAGTTGTCAGTCGTTGACGCGGATAAACCCCGCCCAGTTAACCCCCATccccccg > 1:4919641/1‑146 (MQ=255) caggcagCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCgtg < 1:3361217/150‑1 (MQ=255) aggcagCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCgtgt < 2:4726435/150‑1 (MQ=255) caTGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAg < 2:2577555/150‑1 (MQ=255) aTGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGGTTTGCAGCCCCAAGTTGCAGTTTTCAGTCGGTTAAGCTGATAAACCCCCCCCAGGTAAACCCCATCCCCCCTGTGGCCCgg > 1:2970797/1‑150 (MQ=255) tGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGc < 2:2550951/150‑1 (MQ=255) gcgcGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGGGGGGTTTCCGCCCCCAGTTTCAGTTTTCAGTCGTTGTCGCTGATAAACCCCCCCCGGTTAAACCCCATCCCCCGGGTGGGCAGGCCGGAAt > 1:3057407/1‑150 (MQ=255) gcgGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCCGTAATAc > 2:826799/1‑150 (MQ=255) gggCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCCGCCCCAAGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAg > 2:2073936/1‑150 (MQ=255) ggCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGc < 2:631599/150‑1 (MQ=255) gCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTGCAGCCCCCTGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAAACGCCGTCCCGCGGGTGGCCCGGCAGTAATACAGCg > 2:4474784/1‑150 (MQ=255) gCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCCTGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCCCGGTTAACCGCCTTCCCGCGTGTGGCCAGGCCGTAATACAGCGGCAc > 2:2866499/1‑150 (MQ=255) gCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCGTTGCAGCCCCATGGTGCAGTTGTCAGTCGTTGACGCTGCTAACCCGCGCACTGGTAACCGCCTTCCCGCGGGTGGCCAGGCCGTAAAACAGCGGCAc > 2:802089/1‑150 (MQ=255) ccTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCAcc < 2:97225/150‑1 (MQ=255) tGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTTCATTTTTCAGTAGTTGGCGCTGATAACCCGCGCACAGTTAACCGCCTTCCCCCGTGTGGCCAGGCCGTAATACAGCGGCACCGt > 1:5091041/1‑150 (MQ=255) ccAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCCTGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCCCTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACCGCGGCACCGTCAcc > 2:5075217/1‑150 (MQ=255) cAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCa < 2:4680583/150‑1 (MQ=255) cAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCa < 2:1560491/150‑1 (MQ=255) cAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCa < 2:5193516/150‑1 (MQ=255) aGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCAAGTTGCAGTTGTCAGTCGTTTACGCGGATAAACCCCGCACAGTTAAACCCCGTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCAcccg > 2:1966689/1‑148 (MQ=255) aaaGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAAACCCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCaa > 2:2311373/1‑150 (MQ=255) gcgGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGa < 2:221144/150‑1 (MQ=255) cgGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGaa < 2:4352919/150‑1 (MQ=255) ggAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACCCTGATAAACCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATAAAGCGGCACCCTCACCAGCAAGCCCaaa > 2:4846015/1‑149 (MQ=255) gAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATa < 1:4634589/150‑1 (MQ=255) gAAATCGACCAAGCGGCCATAGTCGGGGCGGCGTTTCCGCCCCAAGTTGCAGTTTTCAGTCGTTGACGCTGATAACCCCCGCACGGTTAACCGCCGTCCCGCGGGTGGCCCGGCCGTAATACAGCGGCACCCTCACCACCACGCCGaaaa > 2:2915686/1‑148 (MQ=255) aTCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGcc < 2:1766735/150‑1 (MQ=255) cGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCCCGCACGGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCAc > 2:3361389/1‑150 (MQ=255) cGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCACATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCAc < 2:3433307/150‑1 (MQ=255) ccAAGCGGCCATAGTCGGGGCTGCGTTGCAGCCCCAGGTTGCACTTGTCAGTCGTTGACCCTGATAACCCGCGCACCGGTAACCGCCATCCCCCGGGTGGCCCCGCCGGAAAACAGCGGCACCCGCACCAGCACGCCCAAAAGCCACGAc > 2:3002168/1‑150 (MQ=255) cAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCTCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACa < 1:104867/150‑1 (MQ=255) ggCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCg < 2:2075647/150‑1 (MQ=255) ggCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCg < 1:2501460/150‑1 (MQ=255) catggggCTGCAAAGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCtt > 2:1683042/4‑150 (MQ=255) catggggCTGCAAAGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCtt > 1:3791757/4‑150 (MQ=255) tCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCATCAAGCCGAATAGCCACGACAGGTCGGCCCCTTc > 1:890054/1‑150 (MQ=255) atggggCTGCAAAGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTc > 1:2055682/3‑150 (MQ=255) atggggCTGCAAAGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTc > 1:1638813/3‑150 (MQ=255) ggggCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGa < 1:2033852/150‑1 (MQ=255) ggggCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGa < 2:3322381/150‑1 (MQ=255) ctTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGtt < 2:4888190/150‑1 (MQ=255) tttGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTc < 1:700213/150‑1 (MQ=255) tttGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTc < 2:1111915/150‑1 (MQ=255) tttGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTc > 2:1878330/1‑150 (MQ=255) tttGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTc < 2:318397/150‑1 (MQ=255) tttGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTc < 1:4185625/150‑1 (MQ=255) tttGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTc < 1:1494857/150‑1 (MQ=255) | GGGTATCAGTCGGTGGCCGCATTCACCAGGGCGTTCGCCAAGGCAGTGGGGGTGCAGCCGGGGGCGTATCGCAGGCAGCATGACGGGCGCGGGCATGCCTGACCCAGCAAAGCGCGGAAATCGACCAAGCGGCCATAGTCGGGGCTGCTTTGCAGCCCCATGTTGCAGTTGTCAGTCGTTGACGCTGATAACCCGCGCACTGTTAACCGCCTTCCCGCGTGTGGCCAGGCAGTAATACAGCGGCACCGTCACCAGCAAGCCGAATAGCCACGACAGGTCGGCCCCTTCGACAATGTTC > NC_002947/4141604‑4141901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |