| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,148,875 | T→A | 11.7% | intergenic (+35/‑88) | PP_3647 → / → PP_3648 | oxidoreductase/carboxymuconolactone decarboxylase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,148,875 | 0 | T | A | 11.7% | 560.8 / 53.3 | 196 | intergenic (+35/‑88) | PP_3647/PP_3648 | oxidoreductase/carboxymuconolactone decarboxylase family protein |
| Reads supporting (aligned to +/- strand): ref base T (84/89); new base A (15/8); total (99/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01 | |||||||||||
Only 100 of 199 total aligned reads displayed.
GGTGACCACGCGATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGCGAGGACTA > NC_002947/4148727‑4149024 | tGACCACGCGATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGc < 1:4861247/150‑1 (MQ=255) ccACGCGATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCcg < 2:1524388/150‑1 (MQ=255) aCGCGATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCcgcg > 1:1424868/1‑150 (MQ=255) cgcgATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGa < 1:1223352/150‑1 (MQ=255) cgcgATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGa < 1:2234654/150‑1 (MQ=255) gcgATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGaa < 1:835141/150‑1 (MQ=255) gcgATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCAAGCCCGCGa > 1:3708580/1‑149 (MQ=255) gcgATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCAAGCCCGCGa < 2:3708580/149‑1 (MQ=255) cgATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAg < 1:220435/150‑1 (MQ=255) gATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCAAGCCCGCGAAGa < 2:3783383/150‑1 (MQ=255) aTCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCAAGCCCGCGAAGAt < 1:1005810/150‑1 (MQ=255) ttGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACACGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGccc < 2:4026986/150‑1 (MQ=255) gTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGaa > 1:2640255/1‑141 (MQ=255) gTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCt < 2:677102/150‑1 (MQ=255) ggCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGtt > 1:1372076/1‑150 (MQ=255) gcgcGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGttt > 2:3669146/1‑150 (MQ=255) ggTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTTATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAg < 1:2015865/150‑1 (MQ=255) ggTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAg < 2:794882/150‑1 (MQ=255) ggTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAg > 1:5127899/1‑150 (MQ=255) ggTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCACGCGAAGATGCCCCTGTTTTCAg < 2:1295375/150‑1 (MQ=255) tGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAggg > 2:3609219/1‑150 (MQ=255) gaagaaCCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAgggg < 2:1600215/150‑1 (MQ=255) gaagaaCCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAgggg > 1:5048102/1‑150 (MQ=255) tGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTa < 2:906413/150‑1 (MQ=255) gCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGtct > 2:2040367/1‑150 (MQ=255) gcCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCgg > 2:4368896/1‑150 (MQ=255) ccGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGt < 1:3608842/150‑1 (MQ=255) ccGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGt > 2:981643/1‑150 (MQ=255) cGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGtt > 1:4641711/1‑150 (MQ=255) aTGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGc < 2:1309052/150‑1 (MQ=255) tGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTTAGTCGATGTTGGCATCTTCGCGGGATTGCCCGCTAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCg < 1:5209897/150‑1 (MQ=255) tGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCg < 2:1219454/150‑1 (MQ=255) cccGTTGGTGTACCACATGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGTGTGGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc < 1:4446897/150‑1 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAg > 2:3149347/1‑98 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAg < 1:3149347/98‑1 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc > 2:1173837/1‑150 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc > 1:2068064/1‑150 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc > 2:2968854/1‑150 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc > 1:5594497/1‑150 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc > 2:3579009/1‑150 (MQ=255) cccGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCAGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGccc > 1:2829096/1‑150 (MQ=255) gATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCtt > 2:5198308/1‑150 (MQ=255) gATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCtt > 1:5219367/1‑150 (MQ=255) gATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCtt > 2:3495253/1‑150 (MQ=255) ggTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCttttt < 1:1611564/150‑1 (MQ=255) gtACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTAt > 2:2673850/1‑150 (MQ=255) gtACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTCCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTAt < 1:2105485/150‑1 (MQ=255) ccACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGcc > 2:5148184/1‑150 (MQ=255) caAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGa < 1:900000/150‑1 (MQ=255) gCAAGCTCGGCGCCCTGCCGCCACTTGGCTGGTACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACt > 2:5312838/1‑150 (MQ=255) gCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACt < 2:1352221/150‑1 (MQ=255) gCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACt < 2:4194893/150‑1 (MQ=255) cAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCAAGCCCGCGa < 1:3666840/75‑1 (MQ=255) aGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGca < 1:5545297/150‑1 (MQ=255) tCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACAt < 1:3891661/150‑1 (MQ=255) tCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACAt < 1:1815646/150‑1 (MQ=255) ggCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCTAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGa < 1:808626/150‑1 (MQ=255) ggCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGa < 1:975762/150‑1 (MQ=255) ggCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGa < 2:293400/150‑1 (MQ=255) ggCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGa > 2:2622116/1‑150 (MQ=255) gcCCAGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTCCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCg > 2:4865446/1‑115 (MQ=255) cccTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCaa > 2:3916449/1‑150 (MQ=255) ccTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAAt < 2:3301899/150‑1 (MQ=255) tGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGa > 2:435329/1‑150 (MQ=255) gccgccACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGaa < 1:2293410/150‑1 (MQ=255) gccgccACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGaa < 1:3636130/150‑1 (MQ=255) gccgccACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGaa < 1:5359249/150‑1 (MQ=255) ccgccACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGaaa < 1:1737070/150‑1 (MQ=255) cACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTa < 2:4683322/150‑1 (MQ=255) cTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACg > 1:5462552/1‑150 (MQ=255) ggCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTa > 2:2586102/1‑79 (MQ=255) ggCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTa < 1:2586102/79‑1 (MQ=255) tACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGcc < 1:4654619/150‑1 (MQ=255) tCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGaa > 2:223594/1‑150 (MQ=255) tCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGaa > 2:3841567/1‑150 (MQ=255) ttGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGaaaa > 2:2404148/1‑150 (MQ=255) gAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATc < 1:4199524/150‑1 (MQ=255) gTCGATGTTGGCATCTTCGCGTGCTTGCCCGCTAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCAGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCg < 1:4484985/150‑1 (MQ=255) tCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTAAGAAAAGGGCCTGAAAATCCGc > 1:5422220/1‑150 (MQ=255) gTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCa > 2:5420122/1‑150 (MQ=255) ttGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAg > 1:3875022/1‑150 (MQ=255) gggCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAgg < 1:3461491/149‑1 (MQ=255) ggCATCTTCGCGGGCAAGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACCGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGt > 2:153276/1‑150 (MQ=255) gCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGt > 1:2907573/1‑58 (MQ=255) gCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTa > 1:1182884/1‑150 (MQ=255) tCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTg < 2:1424868/150‑1 (MQ=255) ttCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg > 2:3552168/1‑150 (MQ=255) ttCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg < 2:4648225/150‑1 (MQ=255) ttCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg > 1:2143742/1‑150 (MQ=255) ttCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTGTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg > 1:1862896/1‑150 (MQ=255) ttCGCGGGCAAGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg > 2:1164385/1‑150 (MQ=255) ttCGCGGGCAAGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg > 1:4834714/1‑150 (MQ=255) ttCGCGGGCAAGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTggg > 2:936362/1‑150 (MQ=255) tCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGc > 2:2864804/1‑150 (MQ=255) tCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGc > 1:3944791/1‑150 (MQ=255) tCGCGGGCAAGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGc > 2:2085752/1‑150 (MQ=255) gcgGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGCGa < 2:5109572/150‑1 (MQ=255) cgGGCAAGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGCGa < 2:1822092/149‑1 (MQ=255) gggCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGCGAgg < 1:248305/150‑1 (MQ=255) ttGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGCGAGGACTa > 2:3906685/1‑150 (MQ=255) | GGTGACCACGCGATCATTGTCGGCGCGGTGAAGAACCTGGTGTTGCCTGAGCAGCCGATGACCCCGATGGTGTACCACAAGGGCAAGCTCGGCGCCCTGCCGCCACTTGGCTGATACATCTTGAGTCGATGTTGGCATCTTCGCGGGCTTGCCCGCGAAGATGCCCCTGTTTTCAGGGGTCGCGCTAATCGTCTCACCCTCGGTTGCGGCCCCTTTTTTATGCCGGAGTACTGCACATGAGCAATGAAAAGTACGAAAAGGGCCTGAAAATCCGCACCCAGGTACTGGGCGAGGACTA > NC_002947/4148727‑4149024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |