| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,160,283 | C→T | 7.7% | G68G (GGG→GGA) ‡ | PP_3658 ← | aromatic compound MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,160,283 | 0 | C | T | 7.7% | 713.0 / 33.8 | 235 | G68G (GGG→GGA) ‡ | PP_3658 | aromatic compound MFS transporter |
| Reads supporting (aligned to +/- strand): ref base C (117/99); new base T (12/6); total (129/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
Only 100 of 238 total aligned reads displayed.
ATAAAGCGCATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATG > NC_002947/4160134‑4160432 | aTAAAGCGCATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTc < 2:5305665/150‑1 (MQ=255) aGCGCATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGa > 1:4856900/1‑150 (MQ=255) gcgcATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGaa < 2:209762/150‑1 (MQ=255) gcgcATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGaa > 1:1709801/1‑150 (MQ=255) gcgcATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAAGGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGaa < 2:1475181/150‑1 (MQ=255) cgcATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAAc > 1:1113701/1‑150 (MQ=255) tGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATg > 1:3558881/1‑150 (MQ=255) tGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATg < 2:2543625/150‑1 (MQ=255) gATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGc > 2:5592913/1‑150 (MQ=255) gATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGc > 1:213055/1‑150 (MQ=255) aTACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCGGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCt < 2:5465052/150‑1 (MQ=255) tACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTg > 1:4690530/1‑150 (MQ=255) tACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCAGTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTg > 2:5154171/1‑150 (MQ=255) aCTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTTCGGGACAATGCTgg < 2:2304969/150‑2 (MQ=255) aCTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGa < 1:2563990/150‑1 (MQ=255) aCTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGa < 1:3049587/150‑1 (MQ=255) tGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagc > 1:73153/1‑150 (MQ=255) ggTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagccagc > 2:2644252/1‑150 (MQ=255) gTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGagccagcc > 1:3878541/1‑150 (MQ=255) tCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAgccagcca > 2:780488/1‑150 (MQ=255) gCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTa > 2:1357405/1‑150 (MQ=255) gCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTa > 1:3347795/1‑150 (MQ=255) gCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCCATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTAcccc > 2:3526217/1‑150 (MQ=255) gTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTTCGGGACAATGCTgg < 1:1519971/128‑2 (MQ=255) gTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTTCGGGACAATGCTgg > 2:1519971/1‑127 (MQ=255) gTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTg > 2:4807864/1‑150 (MQ=255) gTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTg > 1:1262287/1‑150 (MQ=255) tGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTgg < 1:1977606/150‑1 (MQ=255) tGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTgg > 2:1726134/1‑150 (MQ=255) aaCCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGtt > 2:833832/1‑150 (MQ=255) aaCCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGtt < 1:816462/150‑1 (MQ=255) cccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGc < 1:96986/150‑1 (MQ=255) ccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCg < 2:4610574/150‑1 (MQ=255) ccTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCg > 1:2047131/1‑150 (MQ=255) ccGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAAGTCGAACTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCaa < 1:2890492/150‑1 (MQ=255) gCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGAGCTGGTTGCGTCAAtt > 1:4554458/1‑150 (MQ=255) gCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGc < 1:4471899/150‑1 (MQ=255) gCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGc < 1:572313/150‑1 (MQ=255) aaaCGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCgg < 2:5486008/150‑1 (MQ=255) aaCGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGc > 1:1442436/1‑150 (MQ=255) cTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCatg > 2:1272278/1‑150 (MQ=255) aaCAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCatgatg > 2:140041/1‑150 (MQ=255) atcgcTACACAGATCGCGATCATTTTCGGCCGCCCAATTCGATCTGCAAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGACATGAtggct < 1:3603006/148‑1 (MQ=255) aGCGCTACACAGATCGCGATCATTTTTGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGAtggct > 2:2679216/1‑150 (MQ=255) aGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGAtggct < 1:3238381/150‑1 (MQ=255) aGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGAtggct < 2:4690530/150‑1 (MQ=255) cTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCAGAGCCAGACATTACCCCGGCGCTGGTTGCGTCAATTTGCAAATCGGCCATGAAGGCTggca > 2:153436/1‑150 (MQ=255) tACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcag < 1:1146495/150‑1 (MQ=255) tACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcag > 1:3964303/1‑150 (MQ=255) tACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcag > 1:2401999/1‑150 (MQ=255) tACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcag > 1:1913611/1‑150 (MQ=255) cacaGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcaggg < 1:2915019/150‑1 (MQ=255) cacaGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcaggg < 1:2213776/150‑1 (MQ=255) aGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTggcagggcag > 2:4669961/1‑150 (MQ=255) aTCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGcc > 2:3010246/1‑150 (MQ=255) aTCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGcc < 1:3518834/150‑1 (MQ=255) gcgATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGccccc < 2:3964303/150‑1 (MQ=255) aTCATTTTCGGCCGGCCAATTCGCTCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCccacc < 1:4951756/150‑1 (MQ=255) aTTTTCGGCCGGCCCATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACt > 2:2825607/1‑150 (MQ=255) ccggccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCatgatg < 1:3698341/118‑1 (MQ=255) cggccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCg > 2:1340542/1‑150 (MQ=255) cggccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCg > 2:4506842/1‑150 (MQ=255) gccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGCTGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTa < 2:11263/150‑1 (MQ=255) gccAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTa < 2:3875544/150‑1 (MQ=255) aaTTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGcc > 2:438537/1‑150 (MQ=255) aaTTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGcc > 1:5375875/1‑150 (MQ=255) aaTTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGcc > 2:162681/1‑150 (MQ=255) gATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGa < 1:408838/150‑1 (MQ=255) gATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCAGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGa > 1:648278/1‑150 (MQ=255) tCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATa > 2:5406373/1‑150 (MQ=255) tGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAAt > 1:4139330/1‑150 (MQ=255) tGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAAt > 2:416317/1‑150 (MQ=255) gCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATc < 1:3178633/150‑1 (MQ=255) gCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATc < 2:5096256/150‑1 (MQ=255) aaTGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCACGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGa < 1:4159608/150‑1 (MQ=255) aTGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGaa < 2:178661/150‑1 (MQ=255) aTGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGaa < 1:1616339/150‑1 (MQ=255) aTGTGCCTAAAAAAATAGCGCCCAGCAATGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGaa < 2:1706378/150‑1 (MQ=255) gtgCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATc < 1:5170353/150‑1 (MQ=255) ccTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAac < 1:5483655/150‑1 (MQ=255) ccTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAac < 1:3893504/150‑1 (MQ=255) cTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAaca > 1:4237178/1‑150 (MQ=255) cTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAaca > 1:1780538/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 1:346387/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 1:4331264/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 2:3631956/1‑150 (MQ=255) tAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAacac > 1:557668/1‑150 (MQ=255) aTAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCag < 2:4856576/150‑1 (MQ=255) gctggctcAGCATTGTTCGGGACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCaga > 2:4486694/8‑150 (MQ=255) cgcCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaata < 2:557668/150‑1 (MQ=255) cgcCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaata < 2:2047131/150‑1 (MQ=255) tcAGCATTGTTCGGGACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa > 2:3503439/2‑150 (MQ=255) ccAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaa > 2:5025026/1‑150 (MQ=255) cAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCagaatagaat > 2:3985758/1‑150 (MQ=255) cAGCATTGTCCCGAACAATGCTGAGCCAGCAATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGACGTAGCCATCGATAATCAGAATCAACACTCACCagaatagaat > 2:3717450/1‑150 (MQ=255) aGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAgaatagaata > 2:2536802/1‑150 (MQ=255) gCATTGTTCGGGACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATaa > 2:2788298/1‑150 (MQ=255) gTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCa < 1:1357405/150‑1 (MQ=255) tCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCAt > 2:1925042/1‑150 (MQ=255) cccGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATg > 2:4909898/1‑150 (MQ=255) | ATAAAGCGCATGATACTGAAGGTCAGCGGGCTGTCAGTGAACCCTGCCGCAGCGGTGAAAACGCTGAACAGCGCTACACAGATCGCGATCATTTTCGGCCGGCCAATTCGATCTGCCAATGTGCCTAAAAAAATAGCGCCCAGCATTGTCCCGAACAATGCTGAGCCAGCCATTACCCCGGCGCTGGTTGCGTCAATTTGCATATCGGCCATGATGGCTGGCAGGGCAGCCCCCACCACTGCCAAGTCGTAGCCATCGATAATCAGAATCAACACGCACCAGAATAGAATAAGTCCATG > NC_002947/4160134‑4160432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |