| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,258,777 | C→G | 5.1% | intergenic (‑106/+91) | rocE ← / ← PP_3728 | amino acid permease RocE/two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,258,777 | 0 | C | G | 5.1% | 874.2 / 26.5 | 255 | intergenic (‑106/+91) | rocE/PP_3728 | amino acid permease RocE/two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (110/132); new base G (5/8); total (115/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 258 total aligned reads displayed.
TCAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACG > NC_002947/4258629‑4258926 | cAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCaa < 1:3315359/150‑1 (MQ=255) cAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCaa < 1:3544940/150‑1 (MQ=255) aGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAac > 1:1051930/1‑150 (MQ=255) aGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAac > 1:4372991/1‑150 (MQ=255) aGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAac > 1:693193/1‑150 (MQ=255) cgGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGtt < 1:295941/150‑1 (MQ=255) gggTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTTGCACACGGtcc < 2:4113277/150‑3 (MQ=255) gggTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTg < 2:525499/150‑1 (MQ=255) ggTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGc < 2:1276825/150‑1 (MQ=255) gCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATTAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATgg > 2:4626934/1‑150 (MQ=255) tGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAt < 1:2754150‑M2/150‑2 (MQ=255) gATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAtta > 2:1942416‑M2/1‑147 (MQ=255) ttttttCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttatt > 2:1722162‑M2/1‑145 (MQ=255) ttttgtCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttatt > 2:1847372‑M2/1‑145 (MQ=255) tttttCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTTGCACACGGtccatga < 2:2276055/141‑7 (MQ=255) tttCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttattgga < 1:5355775‑M2/150‑9 (MQ=255) tCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGaaa > 2:875890/1‑150 (MQ=255) cAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAAc < 1:4430437/150‑1 (MQ=255) cAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAAc < 2:308765/150‑1 (MQ=255) aaCGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACg > 1:4899632/1‑150 (MQ=255) aaCGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACg > 2:2143071/1‑150 (MQ=255) aaCGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACg > 2:3683655/1‑150 (MQ=255) aCGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACgg < 2:2992275/150‑1 (MQ=255) cGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGa < 1:1275441/150‑1 (MQ=255) cGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGa < 1:4129673/150‑1 (MQ=255) gCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 1:1968765/150‑1 (MQ=255) gCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 1:2303975/150‑1 (MQ=255) gCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt > 1:5005444/1‑150 (MQ=255) gCTGTCAGTCAGGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 2:4663289/150‑1 (MQ=255) tGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGGGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCAGGTCAGTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCAGGGAGTATTGGAAACGGATGt > 1:823400/1‑150 (MQ=255) agtcaTGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAgg > 2:3618049/1‑150 (MQ=255) ggCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGt > 2:4873765/1‑150 (MQ=255) gCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGtt > 1:2888014/1‑150 (MQ=255) cTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGa > 2:2618150/1‑150 (MQ=255) cTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGa > 2:1037277/1‑150 (MQ=255) tCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGaa > 1:5108852/1‑150 (MQ=255) cGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAAc < 1:1777289/150‑1 (MQ=255) cGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGaa < 1:4796408/150‑1 (MQ=255) cGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGaa < 2:266546/150‑1 (MQ=255) ggCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAg > 1:3866703/1‑150 (MQ=255) ggCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAg > 1:1033458/1‑150 (MQ=255) gCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGa < 2:4237101/150‑1 (MQ=255) ccGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGAt < 1:4676796/150‑1 (MQ=255) ccGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGAt > 2:2810281/1‑150 (MQ=255) tGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTaa < 2:135849/150‑1 (MQ=255) gggAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGt < 1:4738958/150‑1 (MQ=255) ggAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTc < 2:4996861/150‑1 (MQ=255) gAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTTGCACACGGtcc > 1:4098012/1‑83 (MQ=255) gAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCg < 2:4539065/150‑1 (MQ=255) ggTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTaa > 2:541900/1‑150 (MQ=255) tCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGAACGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCt > 1:3398781/1‑150 (MQ=255) gAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttt > 1:932044/1‑150 (MQ=255) gAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttt > 1:4856088/1‑150 (MQ=255) gAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttt < 2:5254106/150‑1 (MQ=255) aaTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCtttt > 2:3435072/1‑150 (MQ=255) aTGAGGGGCTGATCGCTTCGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGTATCGAAGATGTAAAAAGTCGTAAGCttttt < 1:2203896/150‑1 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt < 2:1120653/150‑1 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt < 2:2396652/150‑1 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt < 2:1901825/150‑1 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt < 2:1165787/150‑1 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCatttt < 2:2228729/150‑1 (MQ=255) aTGAGGGGCTGAGAGCTACGTCATGTCATTATTCTTGTCTCCAATAAGCCTCATTGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt < 1:2386768/150‑1 (MQ=255) ggggCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTAc > 1:2558215/1‑150 (MQ=255) ggCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGt < 2:5545502/150‑1 (MQ=255) gCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTc < 1:5089167/150‑1 (MQ=255) gCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTc > 2:2995457/1‑150 (MQ=255) cTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCa > 2:2336608/1‑150 (MQ=255) cTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCa < 1:402696/150‑1 (MQ=255) tGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAg > 1:2118152/1‑150 (MQ=255) aGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGct < 1:378853/150‑1 (MQ=255) cgcTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGctct < 2:1621228/150‑1 (MQ=255) gcTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTg < 2:4338225/150‑1 (MQ=255) tACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCTTAAGCTTTTTGTACGTCAGCTCTGaa > 2:3008182/1‑150 (MQ=255) tACGGCATGTCAGTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTACGGCGCCGGTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTGTGTACGTCAGCTCTGaa > 2:5074412/1‑150 (MQ=255) gCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAg < 2:3104453/150‑1 (MQ=255) cATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGc < 1:4014798/150‑1 (MQ=255) aTGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCt > 2:3959555/1‑150 (MQ=255) aTGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCt < 2:800520/150‑1 (MQ=255) tCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt > 2:3346562/1‑72 (MQ=255) tCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 1:3346562/72‑1 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttattggagacaagaataatgacatgccgtagcgctcagcccctcattcgaaccctcccacgcaccggccgcaatggcgaggtgtgccatgactg < 1:919373‑M2/150‑96 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 2:2828828/70‑1 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTcc > 2:685048/1‑150 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTcc > 2:4405535/1‑150 (MQ=255) cTTGTCTCCAATAAGCCTCATTGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTg < 2:4922310/150‑1 (MQ=255) ttGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTgg > 1:269498/1‑150 (MQ=255) ttGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTgg > 1:5588313/1‑150 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg > 2:3191796/1‑150 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg > 1:1469616/1‑150 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg < 1:5021475/150‑1 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg > 1:2308831/1‑150 (MQ=255) ccAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTgg < 1:3634192/150‑1 (MQ=255) ctctacgCCTCATGGACCGTGTGCAAGAGGGTTGCCTTGGATTTTTGGCAACGGATGGAAGGCGCCGTTATACGACCGGATCGAAGATGTAAACAGTCGTAAGCTTTTTGTACGTCAGCTCTGACTCTGCTGTTCGAGCGTGGCACTGGc < 2:3495864/144‑1 (MQ=255) cAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttattggagacaagaataatgacatgccgtagcgctcagcccctcattcgaaccctcccacgcaccggccgcaatggcgaggtgtgccatgactgacagcgttgaaaaa < 2:730966‑M2/150‑110 (MQ=255) aaGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGa < 2:2787635/150‑1 (MQ=255) catggcaaCCGTGTTGCACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTa > 1:4618414/8‑150 (MQ=255) tCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAg > 1:1423528/1‑150 (MQ=255) caaCCGTGTTGCACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTgg > 1:1648673/3‑150 (MQ=255) ccGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTg < 1:540139/150‑1 (MQ=255) cAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACg < 1:1391291/150‑1 (MQ=255) | TCAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACG > NC_002947/4258629‑4258926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |