| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,258,778 | A→C | 5.1% | intergenic (‑107/+90) | rocE ← / ← PP_3728 | amino acid permease RocE/two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,258,778 | 0 | A | C | 5.1% | 886.4 / 25.9 | 254 | intergenic (‑107/+90) | rocE/PP_3728 | amino acid permease RocE/two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base A (111/130); new base C (5/8); total (116/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 263 total aligned reads displayed.
TCAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACGG > NC_002947/4258629‑4258927 | cAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCac < 2:2157624/150‑2 (MQ=255) aGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAac > 1:1051930/1‑150 (MQ=255) ggCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAacac > 1:4316639/1‑150 (MQ=255) gcgGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGt < 1:5409203/150‑1 (MQ=255) cgGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGtt < 1:4650688/150‑1 (MQ=255) cgGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGtt < 1:295941/150‑1 (MQ=255) gggTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTTGCACACGGtcc < 2:4113277/150‑3 (MQ=255) gggTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTg < 2:525499/150‑1 (MQ=255) ggTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTTGCACACGGtcca < 1:2245675/150‑4 (MQ=255) gTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTTGCACACGGtccat < 1:4075079/150‑5 (MQ=255) gCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATTAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATgg > 2:4626934/1‑150 (MQ=255) tGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAt < 2:4979712‑M2/150‑2 (MQ=255) gATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAtta < 2:4650299‑M2/150‑4 (MQ=255) ttttttCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttatt > 2:3168661‑M2/1‑145 (MQ=255) tttCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttattgga < 1:5355775‑M2/150‑9 (MQ=255) tCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGaaa > 2:875890/1‑150 (MQ=255) cAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAAc < 1:4430437/150‑1 (MQ=255) aaCGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACg > 1:4899632/1‑150 (MQ=255) aCGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACgg < 2:2992423/150‑1 (MQ=255) cGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGa < 1:1275441/150‑1 (MQ=255) cGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGa < 1:4129673/150‑1 (MQ=255) gCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 1:2303975/150‑1 (MQ=255) gCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 2:2903938/150‑1 (MQ=255) tGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGt > 2:1591297/1‑150 (MQ=255) tcagtcaTGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTaa < 1:3829782/150‑1 (MQ=255) agtcaTGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAgg < 2:4498089/150‑1 (MQ=255) agtcaTGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAgg < 1:2314074/150‑1 (MQ=255) tcaTGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGgcg > 2:170114/1‑150 (MQ=255) ggCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGt < 2:3331163/150‑1 (MQ=255) gCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGtt > 1:2888014/1‑150 (MQ=255) acacCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTtat < 1:3565755/150‑1 (MQ=255) cacCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTtata < 2:4302742/150‑1 (MQ=255) cTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGa > 1:2438658/1‑150 (MQ=255) tCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGaa > 1:5108852/1‑150 (MQ=255) tCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAGTATTGGAAACGGATGTAAGGCGCCGTTATACGaa > 2:2386121/1‑150 (MQ=255) cGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAAc < 1:1777289/150‑1 (MQ=255) gCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACg > 2:2095700/1‑150 (MQ=255) gCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACg > 2:4233164/1‑150 (MQ=255) gCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGa < 1:4967882/150‑1 (MQ=255) cGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGaa < 1:4796408/150‑1 (MQ=255) cGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGaa < 2:335107/150‑1 (MQ=255) ggCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAg > 1:1033458/1‑150 (MQ=255) ccGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGAt > 2:2810281/1‑150 (MQ=255) gggAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGt < 1:4738958/150‑1 (MQ=255) ggTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTaa > 2:541900/1‑150 (MQ=255) ttCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCGATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGc > 1:93050/1‑150 (MQ=255) ttCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGc > 1:93205/1‑150 (MQ=255) tCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCt > 2:5487236/1‑150 (MQ=255) tCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGAACGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCt > 1:3398781/1‑150 (MQ=255) gAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttt > 1:4856088/1‑150 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt > 1:3494519/1‑150 (MQ=255) aTGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCttttt < 2:1212129/150‑1 (MQ=255) ggggCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTAc > 1:2558215/1‑150 (MQ=255) gCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTc > 2:2995779/1‑150 (MQ=255) gCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTc < 1:5089167/150‑1 (MQ=255) cTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCa < 1:402696/150‑1 (MQ=255) cTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCa > 2:2336608/1‑150 (MQ=255) cTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCa < 1:2054250/150‑1 (MQ=255) tGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAg > 1:2118152/1‑150 (MQ=255) tGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAg > 2:3092344/1‑150 (MQ=255) aGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGaaa > 2:1929739/1‑81 (MQ=255) aGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGct < 1:378853/150‑1 (MQ=255) gcTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTg < 2:187462/150‑1 (MQ=255) cTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGa > 1:1548730/1‑150 (MQ=255) tACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGaa < 2:3483716/150‑1 (MQ=255) tACGGCATGTCAGTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTACGGCGCCGGTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTGTGTACGTCAGCTCTGaa > 2:5074412/1‑150 (MQ=255) cATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGc < 1:4014683/150‑1 (MQ=255) aTGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCt < 2:800520/150‑1 (MQ=255) aTGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTGTGTACGTCAGCTCTGAATCAGCt > 2:3880828/1‑150 (MQ=255) tCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGAt < 1:3346562/72‑1 (MQ=255) cATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAACCGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTACACAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTc < 2:3589199/150‑1 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTcc > 2:2257075/1‑150 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTcc > 2:685048/1‑150 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTcc < 2:4856088/150‑1 (MQ=255) attattCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTcc > 2:2582104/1‑150 (MQ=255) attCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGc < 2:1095328/150‑1 (MQ=255) cTTGTCTCCAATAAGCCTCATTGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTg < 2:4922310/150‑1 (MQ=255) ttGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttattggagacaagaataatgacatgccgtagcgctcagcccctcattcgaaccctcccacgcaccggccgcaatggcga < 2:1752614‑M2/128‑81 (MQ=255) ttGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTgg > 1:5588313/1‑150 (MQ=255) ttGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTgg < 2:2664330/150‑1 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg < 1:5021475/150‑1 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg > 1:78734/1‑150 (MQ=255) tcCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTg > 2:1147447/1‑150 (MQ=255) ccAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTgg > 2:4404418/1‑150 (MQ=255) ccAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTgg > 1:2705575/1‑150 (MQ=255) cAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGAttattggagacaagaataatgacatgccgtagcgctcagcccctcattcgaaccctcccacgcaccggccgcaatggcgaggtgtgccatgactgacagcgttgaaaaa < 2:730966‑M2/150‑110 (MQ=255) aTAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCt < 2:3665645/150‑1 (MQ=255) catggcaaCCGTGTTGCACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTa > 1:4618414/8‑150 (MQ=255) tCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAg > 2:2816670/1‑150 (MQ=255) tCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAg > 1:1423528/1‑150 (MQ=255) tCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAg > 2:2751547/1‑150 (MQ=255) gcaaCCGTGTTGCACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTg > 1:3197201/4‑150 (MQ=255) caaCCGTGTTGCACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTgg > 1:1648673/3‑150 (MQ=255) ccGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTg > 2:1326446/1‑150 (MQ=255) tgCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCaa > 2:3059462/1‑150 (MQ=255) cAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACg > 2:5177160/1‑150 (MQ=255) cAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACg < 1:1391291/150‑1 (MQ=255) aaCACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACgg > 1:692073/1‑150 (MQ=255) aaCACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACgg > 1:862202/1‑150 (MQ=255) aaCACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACgg > 1:278587/1‑150 (MQ=255) | TCAGGGCGCGGGTGAGCTGGATTTTTTCAACGCTGTCAGTCATGGCACACCTCGCCATTGCGGCCGGTGCGTGGGAGGGTTCGAATGAGGGGCTGAGCGCTACGGCATGTCATTATTCTTGTCTCCAATAAGCCTCATGGACCGTGTGCAACACGGTTGCCATGGATTATTGGAAACGGATGTAAGGCGCCGTTATACGAACGGATCGAAGATGTAAAAAGTCGTAAGCTTTTTGTACGTCAGCTCTGAATCAGCTGTTCCAGCGTGGCACTGGCCTGACCTAGCTGGGTGGCCAACGG > NC_002947/4258629‑4258927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |