| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,435,079 | A→C | 7.5% | intergenic (+39/‑145) | PP_3924 → / → PP_3925 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,435,079 | 0 | A | C | 7.5% | 521.0 / 25.1 | 160 | intergenic (+39/‑145) | PP_3924/PP_3925 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (62/86); new base C (4/8); total (66/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.20e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
GTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGAC > NC_002947/4434931‑4435228 | gTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGAc < 1:4238818/150‑1 (MQ=255)gTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGAc > 2:2001826/1‑150 (MQ=255)gTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGAc > 2:4319641/1‑150 (MQ=255) aTCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACgg < 1:4437394/150‑1 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc > 2:3454385/1‑150 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc > 1:3349344/1‑150 (MQ=255) aGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCgg < 1:4907513/150‑1 (MQ=255) cggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGtt < 1:929342/150‑1 (MQ=255) gcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttt > 1:4511192/1‑150 (MQ=255) gcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttt > 1:747238/1‑150 (MQ=255) cgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGttttt < 2:5227427/150‑1 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttt < 2:1608574/150‑1 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGtttttc < 1:5392121/150‑2 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCAAAAAACCGAAGCCGTCAGGCTTCGGtttttc < 2:1867356/150‑2 (MQ=255) aaaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttttttt > 2:5301415/1‑150 (MQ=255) aaaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttttttt > 2:5301256/1‑150 (MQ=255) aaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGtttttcga < 2:2053812/150‑4 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTg > 2:5221916/1‑150 (MQ=255) cGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGcc < 2:4728106/150‑1 (MQ=255) aCGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCGTCGGTTTTTTTTGCCCt > 1:5555919/1‑150 (MQ=255) ggCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGc < 2:521438/150‑1 (MQ=255) gCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCg < 2:2714438/150‑1 (MQ=255) aGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCggg > 1:4867845/1‑149 (MQ=255) aGGCCTGCTTGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGt < 1:4589963/150‑1 (MQ=255) ggCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg < 1:2041934/150‑1 (MQ=255) ggCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg < 1:2309027/150‑1 (MQ=255) ttCATGGGGGGCACGCGGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCCGCGAGCTGTTCCCGCCCGGCGGGCTGGGAATCCCGGATGACCGAAAAACCGACCCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGt < 1:3237274/150‑1 (MQ=255) cATGGGTGTCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGa < 1:4847994/150‑1 (MQ=255) aTGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGAt < 2:659196/150‑1 (MQ=255) tGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATc > 2:1088401/1‑150 (MQ=255) ggTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATcca < 1:2825953/150‑1 (MQ=255) ggCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccacca < 2:49226/150‑1 (MQ=255) cAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGc < 2:1215319/150‑1 (MQ=255) gCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAac > 1:3743438/1‑150 (MQ=255) tGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAacac < 2:3755299/150‑1 (MQ=255) tGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAacac < 2:3755163/150‑1 (MQ=255) tGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAacac > 1:3523868/1‑150 (MQ=255) gCGGGTTGATGGCGACATGATGCTGTCGATGTAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACAcc < 1:2107381/150‑1 (MQ=255) gCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACAcc < 1:887164/150‑1 (MQ=255) ggTTGAAGGCGACATGATGCTGTCGATGAAACTCTGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTc < 2:4299241/150‑1 (MQ=255) ggTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTc < 2:2698538/150‑1 (MQ=255) tGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAcc < 2:1262742/150‑1 (MQ=255) gCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAttt < 1:1457531/150‑1 (MQ=255) gatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccacca < 1:3039914/124‑1 (MQ=255) gTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACg > 1:1229304/1‑150 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGAtt < 2:2222237/150‑1 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGAtt > 1:4018910/1‑150 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGAtt < 1:1629160/150‑1 (MQ=255) gAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGtt < 1:1929384/150‑1 (MQ=255) aaaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTc > 1:3025199/1‑150 (MQ=255) aaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTcc < 2:2270653/150‑1 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAc > 1:953068/1‑150 (MQ=255) cAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAcc > 1:2781438/1‑150 (MQ=255) aGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAccc > 1:2781175/1‑150 (MQ=255) aGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAccc > 1:2365315/1‑150 (MQ=255) aGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAccc > 1:2227582/1‑150 (MQ=255) gAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTgg < 1:4057663/150‑1 (MQ=255) aGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGc < 2:3772345/150‑1 (MQ=255) cTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCgg > 1:4941664/1‑150 (MQ=255) tGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGa < 1:3383008/150‑1 (MQ=255) ttCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCGTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAcc > 2:950476/1‑150 (MQ=255) cccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATGTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAt > 2:4876738/1‑150 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 2:1109662/1‑150 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 1:5334981/1‑150 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 1:3350008/1‑150 (MQ=255) cGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa < 2:5047528/150‑1 (MQ=255) gTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAg < 2:4412044/150‑1 (MQ=255) cTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGAtt > 2:3512569/1‑150 (MQ=255) tGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTa > 2:4985501/1‑150 (MQ=255) gggCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAccc > 1:5568874/1‑150 (MQ=255) gCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCaa < 1:2429111/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa > 2:1331431/1‑150 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa < 2:5555919/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa > 1:3184047/1‑150 (MQ=255) ggAATACCGGATGATCGAAAATCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCCGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAATAGATTACCCAATAGt > 2:4332552/1‑150 (MQ=255) gAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTa < 1:21868/150‑1 (MQ=255) gatCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTTTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga > 1:1668929/1‑150 (MQ=255) gatCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 2:3890661/150‑1 (MQ=255) gatCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 1:3855300/150‑1 (MQ=255) caaaaaaaaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCgag > 1:1079126/5‑150 (MQ=255) atCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCgag < 2:3025199/150‑1 (MQ=255) aaaaaaaaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAcc < 2:3095575/105‑1 (MQ=38) aaaaaaaaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAcc > 1:3095575/4‑108 (MQ=38) cGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGaa < 1:1088401/150‑1 (MQ=255) aaaaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATa > 1:3550543/1‑150 (MQ=255) aaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAg < 2:2759520/150‑1 (MQ=255) aaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAgg < 2:859215/150‑1 (MQ=255) aaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAgg < 1:3454411/150‑1 (MQ=255) aaCCGAAGCCTGACGGCTTCGGTTTTTATTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAATTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAgg < 2:1381010/150‑1 (MQ=255) aCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGa < 2:2870488/150‑1 (MQ=255) aCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGa > 1:218018/1‑150 (MQ=255) ccGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGaa > 1:476288/1‑150 (MQ=255) ccGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGaa < 1:5217438/150‑1 (MQ=255) gAAGCCTGACGGCGTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCCCATGGGACGATTGTTCCAACCCTGGCGGACCAGTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGa > 2:816420/1‑150 (MQ=255) ccTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCa < 1:3636575/150‑1 (MQ=255) cTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCAt < 2:4902356/150‑1 (MQ=255) cTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCAt < 2:5563339/150‑1 (MQ=255) tGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATg > 2:4693881/1‑150 (MQ=255) tGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATg > 1:1295998/1‑150 (MQ=255) tGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACACATg > 1:2292203/1‑150 (MQ=255) | GTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGAC > NC_002947/4434931‑4435228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |