| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 343,611 | G→C | 5.5% | intergenic (‑164/‑76) | PP_5439 ← / → PP_5440 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 343,611 | 0 | G | C | 5.5% | 987.5 / 34.3 | 289 | intergenic (‑164/‑76) | PP_5439/PP_5440 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (108/165); new base C (5/11); total (113/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
Only 100 of 292 total aligned reads displayed.
GTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCGC > NC_002947/343462‑343760 | tGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATTCATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt < 1:1146927/150‑1 (MQ=255) aGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtg < 1:4170106/150‑1 (MQ=255) aGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtg < 2:1008605/150‑1 (MQ=255) gTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg > 1:2445038/1‑150 (MQ=255) tGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg > 1:2157281/1‑150 (MQ=255) tGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg < 2:1860870/150‑1 (MQ=255) aaGTGCGCGTATTGAAGCGCTATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 2:4849720/150‑1 (MQ=255) aaGTGCGCGTATTGAAGCGCAATTGCCCGATAACCCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACATGGCTGGCa < 2:3200710/150‑1 (MQ=255) aaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 2:3149787/150‑1 (MQ=255) aaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 1:3758443/150‑1 (MQ=255) gTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGc < 1:5630471/150‑1 (MQ=255) gTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACATGGCTGGCAGc < 2:1063451/150‑1 (MQ=255) gcgcGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCt < 2:2108421/150‑1 (MQ=255) gcgcGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCt < 1:3244298/150‑1 (MQ=255) gcgcGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACATGGCTGGCAGcag < 1:3549067/150‑3 (MQ=255) gcgcGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACATGGCTGGCAGcag < 1:726189/150‑3 (MQ=255) gTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCa > 1:4148976/1‑150 (MQ=255) gTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCa < 1:1798344/150‑1 (MQ=255) aTTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACt > 2:1590344/1‑150 (MQ=255) tGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgc > 2:817143/1‑150 (MQ=255) aaGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc < 2:1342408/150‑1 (MQ=255) aaGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc > 2:729754/1‑150 (MQ=255) aGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGcc > 1:2333582/1‑150 (MQ=255) aGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGcc > 1:3952438/1‑150 (MQ=255) gcgcAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCa > 1:3485358/1‑150 (MQ=255) gcgcAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCa > 2:2298995/1‑150 (MQ=255) cgcAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCaa > 1:5417095/1‑150 (MQ=255) gccaTTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAAt > 2:2936314/4‑150 (MQ=255) aaTTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTc > 2:2615861/1‑150 (MQ=255) aTTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTTGCTTCTCTCCTGCTGCCAGCCATGTTGGATGGCAGCCTGTCACTGCGCCAATTCg < 1:4918125/150‑1 (MQ=255) aTTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCg < 1:4723677/150‑1 (MQ=255) cccGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGt > 2:2880284/1‑150 (MQ=255) cGATAAACCCCAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTcc < 2:3952438/150‑1 (MQ=255) cGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTcc > 1:5038380/1‑150 (MQ=255) cGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTcc > 2:4201116/1‑150 (MQ=255) aTAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgt < 2:960845/150‑1 (MQ=255) agcgcccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtg > 1:2756466/5‑150 (MQ=255) aaaCCGAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTTTTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTGGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtga < 2:2695238/150‑1 (MQ=255) aaaCCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGTATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtga < 1:5321458/150‑1 (MQ=255) aCCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt > 1:2947971/1‑150 (MQ=255) cccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtg > 1:5515208/1‑150 (MQ=255) ccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtga > 1:800083/1‑150 (MQ=255) aaGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATg < 1:130687/150‑1 (MQ=255) gcgcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCAc > 2:4115636/1‑150 (MQ=255) gcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGt > 2:5544860/1‑150 (MQ=255) gcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGt < 1:4999100/150‑1 (MQ=255) cgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGtt < 1:3269226/150‑1 (MQ=255) cTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACaa < 2:4562135/150‑1 (MQ=255) tGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACaaa > 2:5106774/1‑150 (MQ=255) gCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAag > 1:2678193/1‑150 (MQ=255) aGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga < 1:5277497/150‑1 (MQ=255) aGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga < 2:4896521/150‑1 (MQ=255) gcctGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAaggag < 1:844368/147‑1 (MQ=255) gCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAaggag < 2:3627790/150‑1 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga < 2:5412030/150‑1 (MQ=255) ttGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga < 1:4823891/150‑1 (MQ=255) aTGTCTGTGGGATACATATCCAGATTATTCTGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTTGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCAGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCAt < 2:520965/150‑1 (MQ=255) tGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATg < 1:2769926/150‑1 (MQ=255) gTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGa < 1:950285/150‑1 (MQ=255) tgtgGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGc > 2:4955881/1‑150 (MQ=255) tgtgGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTACCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGc > 2:337925/1‑150 (MQ=255) tgtgGGATACATACCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTcgatcctt < 2:2529009/150‑8 (MQ=255) ggATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACtt < 2:1934402/150‑1 (MQ=255) aTACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACtttt < 2:2638422/150‑1 (MQ=255) aCATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTAt < 2:1425412/150‑1 (MQ=255) aCATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTAt > 2:717428/1‑150 (MQ=255) cATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATc < 2:3018530/150‑1 (MQ=255) atCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTgc > 1:1012409/1‑114 (MQ=255) tCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGt < 1:1440537/150‑1 (MQ=255) tCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTCTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGACATGAAGCACTTTTATCTGGt > 2:5505798/1‑150 (MQ=255) ccAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTc > 2:568373/1‑150 (MQ=255) ccAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTc < 1:4428848/150‑1 (MQ=255) ttCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTa > 2:3701549/1‑150 (MQ=255) cGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACg < 1:1056185/150‑1 (MQ=255) cGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACg < 1:3884521/150‑1 (MQ=255) ggACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCTTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGGACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACgg < 1:181542/150‑1 (MQ=255) gACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGc < 2:4402318/150‑1 (MQ=255) aCCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCt < 2:2242964/150‑1 (MQ=255) ccGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTa > 1:410375/1‑150 (MQ=255) tGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTacac < 1:1221308/150‑1 (MQ=255) gCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGa < 1:3968/150‑1 (MQ=255) gCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGa < 2:1508424/150‑1 (MQ=255) ccTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACg > 1:4591535/1‑150 (MQ=255) ccTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACg > 2:3878600/1‑150 (MQ=255) cTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGa > 2:3529796/1‑150 (MQ=255) tAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCa < 1:5189566/150‑1 (MQ=255) tAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCa < 1:1499328/150‑1 (MQ=255) tAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCa < 2:236542/150‑1 (MQ=255) tAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCa < 1:2165830/150‑1 (MQ=255) aGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAg > 1:1693492/1‑150 (MQ=255) tctcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTa > 1:2005120/1‑150 (MQ=255) tcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACt > 1:863741/1‑150 (MQ=255) acaggctgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACt > 2:606223/5‑150 (MQ=255) ccTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTa > 1:340006/1‑150 (MQ=255) gctgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga > 2:5007891/1‑85 (MQ=39) tgcCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTAGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCaa > 2:1181333/1‑150 (MQ=255) tgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCCACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTa < 1:1561637/115‑1 (MQ=255) caTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGttt < 2:2157281/150‑1 (MQ=255) aTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTc > 1:48953/1‑150 (MQ=255) tGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCg < 1:5569536/150‑1 (MQ=255) | GTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTCGC > NC_002947/343462‑343760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |