| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,535,018 | T→A | 8.9% | intergenic (+31/‑137) | PP_4018 → / → topB | acetyltransferase/DNA topoisomerase III |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,535,018 | 0 | T | A | 8.9% | 567.5 / 37.4 | 192 | intergenic (+31/‑137) | PP_4018/topB | acetyltransferase/DNA topoisomerase III |
| Reads supporting (aligned to +/- strand): ref base T (110/65); new base A (6/11); total (116/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.34e-01 | |||||||||||
Only 100 of 201 total aligned reads displayed.
TCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGTTT > NC_002947/4534869‑4535166 | tCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGtt < 2:4124883/150‑1 (MQ=255)tCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGtt > 2:2772084/1‑150 (MQ=255) cAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGttt > 2:2081227/1‑150 (MQ=255) gcgcCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAc < 2:3465030/150‑1 (MQ=255) ccAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCc‑gc > 1:3485564/1‑150 (MQ=255) ccAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGTTTAACc‑gc > 1:493219/1‑150 (MQ=255) aGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGa < 1:4147701/150‑1 (MQ=255) aGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGa < 1:1778592/150‑1 (MQ=255) aGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGa > 2:1113187/1‑150 (MQ=255) aGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGa < 2:1342860/150‑1 (MQ=255) aGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACAc‑gcgc > 1:2918078/1‑149 (MQ=255) ggTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAACCC‑GCGaa < 1:1575430/150‑1 (MQ=255) ggTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCGTCGCGGGTAAACCC‑GCGaa < 1:2091783/150‑1 (MQ=255) gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAag < 1:1595178/150‑1 (MQ=255) gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAACCC‑GCGTag < 1:2270812/150‑1 (MQ=255) tGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAaga < 2:1414378/150‑1 (MQ=255) tGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAaga < 2:597233/150‑1 (MQ=255) tGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAaga > 2:772064/1‑150 (MQ=255) tGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAACCC‑GCGAaga < 1:1151286/150‑1 (MQ=255) gCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAagag < 1:3347696/150‑1 (MQ=255) acgccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGTTGCGCGACTCGCGCGCCTGATCCATCACATGCACTGGCCTCTTCGCGGGTTTACCA‑GCGAAGAGGc > 2:684270/1‑150 (MQ=255) acgccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGc < 2:3204244/150‑1 (MQ=255) acgccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGc < 2:1924168/150‑1 (MQ=255) acgccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGc > 1:2875863/1‑150 (MQ=255) cgccacgccGTTCTCTGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGACGCGGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGcc < 2:320855/150‑1 (MQ=255) gccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAACC‑GCGAAGAGGCCg > 1:783041/1‑150 (MQ=255) ccacgccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCgg > 2:4672641/1‑150 (MQ=255) gccGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCa > 2:2523858/1‑150 (MQ=255) cGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGa < 1:3105071/135‑1 (MQ=255) tCTTTGAGCGGCGGGGCTTTCGCGTTGTCTGGGAGTCATTCCTCTATGCTGGCTTCCGGCATGTCGACTGGGTGCGCGACTCGCGCGCGGGTTCCATCACCTGCAGTGGCCTCTTCGGGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGa < 2:3264677/150‑1 (MQ=255) cTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGat > 1:4315695/1‑150 (MQ=255) tATGAGCGGCTGGGCTTTCGCGTCGTCAGCGAGGAATACCGCGACGCTGGCACCCCGCATGTCGACATGGGGCGCGACTCGCGCGCCTGATCAATCACCTGCACGGGCCTCTTGGCGGTTTTACCC‑GCGAAGAGGCCGGCTCAGGCGata < 2:902874/150‑1 (MQ=255) tATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGata > 2:5101363/1‑150 (MQ=255) ttGAGGGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCGCGAAGCTGGCATCCCGCATGGCGCCCGGGGGCGCGACTCGCGCGCCGGATCCATCGCCTGAGCCGGCCTCTTCGCGGGTACCCCC‑GCGAAGAGGCCAGTGCAGGTGatgg < 1:5095844/149‑3 (MQ=16) cGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATc > 2:1786185/1‑150 (MQ=255) tGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGTTTAACC‑CCCAAGAGGCCGGCACAGGCCATATACaaacccc > 1:251939/1‑144 (MQ=255) gggCTTGCGCGTTGTCCGCGTGTATTGCCTCGACGCGGGCCTCCCGCTTGTCGACTGGGGGCGCGACTCGCGCGCCTCATCCATCACCTGCACGGGCCTCTGGGGGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGc < 2:4316462/150‑1 (MQ=255) ggttttCGCGTAGCCAGCGCGTATTGCCTCGACGCTGCCTCCCCGATTGTCGACTGGGTGCGCGACTCGCGCGCCTTATCAAGCACCGGCACGGGCGTGTTGGGGGGTTTACCC‑GCCTCGAGGCCGGCTCAGGCGATATACATCCCCGCt < 2:1024826/147‑1 (MQ=255) ggCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCt > 2:434471/1‑150 (MQ=255) tttCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGAc > 2:5367936/1‑150 (MQ=255) tttCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGTTTACCC‑GCGAATAGGCCGGCTCAGGCGAAATACAACCCCGCAGAc > 1:1083512/1‑150 (MQ=255) gggttgTCCGCGTGTAATTCCGCTACGCGGCCACCCCGATTGCCGACTGGGGGCGCGCCCCGCGCGCCTGACCAATCCCGGGCAC‑GGGCGCTTTGGGGGTTTTCCCGGCTACGAGGCCGGCTCAGGCGATATACATCCCCGCTGACaaaa < 2:5173754/145‑1 (MQ=255) gcgTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACaaaa > 1:4663795/1‑150 (MQ=255) gTCCGCGCGTAATTCCTCGACGCTTGAATCCCTCTTGTCTACTTGGTGCGCGACTCGCGCGCCTGATCAATCACCTGAACTGTCCTCTTCGGGGTTTTCCCG‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCt < 2:1965994/150‑1 (MQ=255) tCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTg > 2:396933/1‑150 (MQ=255) tCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCGGACAAAAAACCTg > 1:1377495/1‑150 (MQ=255) tCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAACC‑CCGAAGAGGCCGGCTCAGGCGATATAAAACCCCCCAGACAAAAAAACTg > 1:3907397/1‑150 (MQ=255) aGCGAGTATTTCCTCGATGGTGGCATCCCGCATGTCTACTGGGTGGGCGACTGGCGCGCGGTTACCATCACCTGCAGTGGCCTCTGCGGGTTTTTCCCG‑GCGACGTGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTa < 2:3838826/150‑1 (MQ=255) gCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGTTTTACC‑CCGAAGAGGCCCGCTCAGGCGCTATAAAACCCCCCAGACAAAAAACCAGTAc > 1:1872465/1‑150 (MQ=255) gAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAaga < 2:3096729/103‑1 (MQ=255) gAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACCAAAAACCTGTAcat > 2:1554566/1‑150 (MQ=255) aGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑CCGAAGAGGCCGGCTCAGGCGATATACAAACCCGCTGACAAAAAACATGTAcatc > 1:1970597/1‑150 (MQ=255) ttCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACatccatcc > 2:4179068/1‑150 (MQ=255) ttCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACatccagcc > 2:4800359/1‑150 (MQ=255) cTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCCGCTCAGGCGCTATACATCCCCCCGGACAAAAAACCTGTACATCCATCCAGa > 1:3815010/1‑150 (MQ=255) cTCGAAGCTGGCATCACGCATGTCGACAGGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGACGCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCAGCCCGa > 2:3644573/1‑150 (MQ=255) tCGAGGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGTTCCATCACCTGCACTGGCCTCTTCGGGGGGTTACCC‑GCGTAGAGGCCGGCGCAGGCGATATACATCCCCGCTGGCCAAATAGCTGTAGATGCATCGAGAt > 1:677342/1‑150 (MQ=255) tCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGAt > 1:3627548/1‑150 (MQ=255) tCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGAt > 2:3927322/1‑150 (MQ=255) tCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGAt > 2:5420652/1‑150 (MQ=255) tCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGGTTACCC‑GCGAAGAGGGCGGCACAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGAt > 2:1184499/1‑150 (MQ=255) gCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTAACC‑CCGAAGAGGCCGGCTCAGGCGATATAAATACCCCCGGGCAAAAAAACAGTACATACAAACAGATaaaaa > 1:3052201/1‑149 (MQ=255) gCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCTTCCAGATAAAACTTGc > 2:5051794/1‑150 (MQ=255) gCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTgcg > 1:4604499/1‑150 (MQ=255) gTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGcccc > 2:4021481/1‑150 (MQ=255) tCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCAGTACAAACATACAGATAAAACTTGCCTCTGCGccccc > 2:2022708/1‑150 (MQ=255) aCATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑CCGGAGAGGCCGGCTCAGGCGAAATAAATACCCGCTGTCAAAAAAACAGTACAAACAAACAGCAAAAACATGCCGCTGCGCCCCCGca > 1:4747395/1‑149 (MQ=255) aCATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACAC‑GCGAAGAGGCCGGCTAATGCGATATACATCCCCGCTGGCAAAAAAAATGTACATACATCCATATAAATCTTTCCTCTGCGGCCCCGCt > 1:5029852/1‑150 (MQ=255) tGGGGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTgc < 2:1249932/150‑1 (MQ=255) cgcgACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATc > 2:4299196/1‑150 (MQ=255) cgACTCGCGCGCCTGATCCATCACGTGCACGGGCCTCTTCGGGGGTTTACCC‑GCGAAGCGGCCGGCTCAGGCGATAGACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCt < 2:5247848/150‑1 (MQ=255) tCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATgg > 1:3689503/1‑150 (MQ=255) gcgcgcCTGAACCATCACCGGCACGGGCCTCTTCGGGGTTTTACCC‑GCCAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGcc < 2:2887609/150‑1 (MQ=255) aTCACCTGCAGTGGCCTCTGCGGGGGTTTACCC‑GCTAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATg < 2:725102/150‑1 (MQ=255) aTCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATg > 2:2677768/1‑150 (MQ=255) aTCACCGGCCCGGGCCGCTGCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACAGCCAGCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATg < 2:4558636/150‑1 (MQ=255) cTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATACATACAGATAAAACTTGCCACTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCg > 1:3276221/1‑150 (MQ=255) gCAGTGGCCTCTGCGGGGGTTTACCC‑GCTATGAGCCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTc < 2:1861452/150‑1 (MQ=255) ggCCTCTTCGCGGTTTTACCC‑GCTAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCgg < 2:2938664/150‑1 (MQ=255) ggCCGCTGCGGGGGTTTACCC‑GCGACGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCgg < 2:4848538/150‑1 (MQ=255) gCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGc > 2:3328997/1‑150 (MQ=255) ctctTCGCGTGTTTACCC‑GCTAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCa < 2:251939/150‑1 (MQ=255) ctctTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCa > 2:3541398/1‑150 (MQ=255) ctctTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCa > 2:4391309/1‑150 (MQ=255) ctctTCGCGGGTAAACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCa > 2:3703215/1‑150 (MQ=255) ctctTCGCGGGTAAACCC‑GCGAAGAGGCCAGTGCAGGTGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCa > 2:4409765/1‑150 (MQ=38) tctTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCAt > 2:3311790/1‑150 (MQ=255) tctTCGCGGGTTAACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACACCGATGAAGCGTCCCCGGCCAt > 2:4631431/1‑150 (MQ=255) tctTCGCGGGTAAACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCAt > 2:2373357/1‑150 (MQ=255) tctTCGCGGGTAAACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCAt > 2:4109819/1‑150 (MQ=255) ttCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGa < 1:3461698/130‑1 (MQ=255) ttCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGa > 2:3461698/1‑130 (MQ=255) tCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATgcg > 2:3453757/1‑150 (MQ=255) tCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATgcg > 1:5455084/1‑150 (MQ=255) tCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATgcg > 1:2633223/1‑150 (MQ=255) gcgGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGcc > 2:4572287/1‑150 (MQ=255) gcgGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGcc > 1:5221405/1‑150 (MQ=255) cgGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCt < 1:4572205/150‑1 (MQ=255) ggTTTCCCG‑GCTAAGTGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGt < 1:4148391/150‑1 (MQ=255) tttACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGttt > 2:3656507/1‑150 (MQ=255) | TCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTACCC‑GCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGCCCACCACCCCGATGAAGCGTCCCCGGCCATGCGCCTGTTT > NC_002947/4534869‑4535166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |