| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,730,035 | G→A | 6.4% | intergenic (+25/+43) | PP_5661 → / ← PP_4183 | putative lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,730,035 | 0 | G | A | 6.4% | 728.7 / 24.3 | 234 | intergenic (+25/+43) | PP_5661/PP_4183 | putative lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (101/117); new base A (9/6); total (110/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 243 total aligned reads displayed.
ACGAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTA > NC_002947/4729886‑4730182 | aCGAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCcgacg > 1:5146150/1‑150 (MQ=255) gccgccGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTc > 2:294619/1‑150 (MQ=255) ccgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCGGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCg < 2:2453560/150‑1 (MQ=255) ccgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCg > 2:5629172/1‑150 (MQ=255) gccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGAt < 1:4494466/144‑1 (MQ=255) ccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCgg < 1:1761966/148‑1 (MQ=255) ccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCgg > 2:1761966/1‑148 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGtt < 1:536118/150‑1 (MQ=255) aGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACATCGTCGGGtttt < 1:4240080/150‑1 (MQ=255) aGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACATCGTCGGGtttt < 1:2079465/150‑1 (MQ=255) ggAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGCCGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGttttt < 1:1997538/150‑1 (MQ=255) ggAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGttttt < 1:3571075/150‑1 (MQ=255) gCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACtt > 1:1058416/1‑150 (MQ=255) gCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACATCGTCGGGttttttt < 1:445745/136‑1 (MQ=255) ccAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACttt > 1:199114/1‑150 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc < 1:402525/150‑1 (MQ=255) aaaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AATAAAACCCGACGATGTCGGGTTTTTTTGTGCGTGCGAACTTTCg > 2:5443463/1‑150 (MQ=255) aaaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCg > 2:2344058/1‑150 (MQ=255) aaGCTCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGGCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 2:2198468/150‑1 (MQ=255) aaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 1:2872590/150‑1 (MQ=255) cAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAAt < 1:1173779/150‑1 (MQ=255) aGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATc < 2:2760770/150‑1 (MQ=255) aGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATc < 2:5581958/150‑1 (MQ=255) ggCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACAGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAGAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCg > 1:835050/1‑150 (MQ=255) gCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGt > 2:1049334/1‑150 (MQ=255) gCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGt > 1:736463/1‑150 (MQ=255) gCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGGCGGGTTTTTTTGTGCCTGCGAACTTTCGAGTAATCGt > 2:3230610/1‑150 (MQ=255) cGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGttt < 2:4103452/150‑1 (MQ=255) gAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACCCCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTc < 2:870609/150‑1 (MQ=255) gAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTc < 2:4832084/150‑1 (MQ=255) aaGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCa > 2:1412798/1‑150 (MQ=255) aGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAg < 2:1422213/150‑1 (MQ=255) cGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTg < 2:766778/150‑1 (MQ=255) gAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTGTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTgg > 2:5510615/1‑150 (MQ=255) aGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaac > 1:3847790/1‑150 (MQ=255) gAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAATCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAcaca > 1:5262336/1‑150 (MQ=255) cTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGa < 1:4390417/150‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg > 2:338280/1‑150 (MQ=255) ccGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAAGTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCt > 2:4930629/1‑150 (MQ=255) gaagaaGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCttt < 1:1667788/150‑1 (MQ=255) aagaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGACCTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTc > 1:3362419/1‑150 (MQ=255) gaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCt < 2:1181287/150‑1 (MQ=255) gaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCt < 1:2639544/150‑1 (MQ=255) aagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCtt < 2:5498803/150‑1 (MQ=255) agCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg < 2:826829/150‑1 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACTTGCCAAGCTGTAATTTGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCATGCGAACTTTCTATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg < 1:4762718/150‑1 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg > 1:4011658/1‑150 (MQ=255) gCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTGTCCTTGGCCg > 2:4371675/1‑150 (MQ=255) ggCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTcc < 1:3124507/150‑1 (MQ=255) gCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCg < 2:4674780/150‑1 (MQ=255) tACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGGTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGAc > 2:4241874/1‑150 (MQ=255) aCTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACa < 1:215646/150‑1 (MQ=255) cTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACa < 1:3555372/150‑1 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt > 1:2557614/1‑150 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt > 1:3868252/1‑150 (MQ=255) tCCGGCTCCTACAACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACATTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt > 1:218073/1‑150 (MQ=255) cGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTac > 1:2893280/1‑150 (MQ=255) ccTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACttt < 2:3731614/150‑1 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtc < 1:3760639/150‑1 (MQ=255) tactacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGGAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcg > 1:2226058/1‑150 (MQ=255) tacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtc < 1:5479328/150‑1 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt > 1:5581742/1‑150 (MQ=255) gCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGa > 1:2293699/1‑150 (MQ=255) aGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCt < 2:4179397/65‑1 (MQ=255) aGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCt > 1:4179397/1‑65 (MQ=255) gAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAaca > 1:2757694/1‑150 (MQ=255) aaCCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAacac < 2:5323148/150‑1 (MQ=255) ccTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCa < 1:5499170/150‑1 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt > 1:1413144/1‑150 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt < 2:5617624/150‑1 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGCTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt < 2:1628109/150‑1 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGCTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt < 1:1464626/150‑1 (MQ=255) tGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATc > 1:1598377/1‑150 (MQ=255) aGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATc < 1:929319/150‑1 (MQ=255) cAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 1:3267236/150‑1 (MQ=255) aGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACACTACACTTTCGGTCGGTGTGAACACCATCACATCGAg < 2:3847790/150‑1 (MQ=255) ttGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACAt < 2:4557213/150‑1 (MQ=255) ggCTAAAAC‑AACAAAACCCGACGAGGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCCTCACATCGATTACATcc < 2:4481470/150‑1 (MQ=255) cTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGa > 2:27791/1‑150 (MQ=255) tAAAAC‑AATAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa > 2:1072600/1‑150 (MQ=255) tAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa > 2:1881233/1‑150 (MQ=255) tAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa > 1:4666048/1‑150 (MQ=255) aaaaC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAAt < 1:2381339/150‑1 (MQ=255) aaaaC‑AAAAAAACAACACGATGTCGTGTTTTATTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGATTTCCTTGGCCGGCTCCGACAGTACACATTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAAt < 2:2107825/150‑1 (MQ=255) aaaC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATg < 1:5380523/150‑1 (MQ=255) aaC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATgg > 2:3103414/1‑150 (MQ=255) aC‑AAAAAAACCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGa > 2:3048731/1‑150 (MQ=255) c‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGaa < 1:1191960/150‑1 (MQ=255) c‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGaa > 2:2056767/1‑150 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAAc > 2:3327188/1‑150 (MQ=255) aaaaaaaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAAc > 1:3096532/1‑150 (MQ=255) aaaaaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActc > 1:5523256/1‑150 (MQ=255) aaaaaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActc > 1:4951404/1‑150 (MQ=255) aaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActct < 2:2520901/150‑1 (MQ=255) aaaaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActct > 2:2096708/1‑150 (MQ=255) aaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCg > 2:1615541/1‑150 (MQ=255) aCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGa < 2:5141417/150‑1 (MQ=255) aCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGa < 1:1881233/150‑1 (MQ=255) ccGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACg > 1:4872497/1‑150 (MQ=255) cgacgaTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACgg > 1:491267/1‑150 (MQ=255) | ACGAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTA > NC_002947/4729886‑4730182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |