Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,773,051 G→C 6.5% P252R (CCT→CGT) ‡ PP_4218 ← lipase/esterase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,773,0510GC 6.5% 869.9 / 38.4 261P252R (CCT→CGT) ‡PP_4218lipase/esterase family protein
Reads supporting (aligned to +/- strand):  ref base G (129/113);  new base C (15/2);  total (144/117)
Fisher's exact test for biased strand distribution p-value = 4.83e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01

Only 100 of 263 total aligned reads displayed.

CCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAA  >  NC_002947/4772902‑4773194
                                                                                                                                                     |                                                                                                                                               
  tcGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGt                                                                                                                                               <  2:1138437/150‑1 (MQ=255)
  tcGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGt                                                                                                                                               <  2:1715622/150‑1 (MQ=255)
  tcGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGt                                                                                                                                               >  2:2692443/1‑150 (MQ=255)
         tCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGt                                                                                                                                        <  2:349666/150‑1 (MQ=255)
         tCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGt                                                                                                                                        <  2:663251/150‑1 (MQ=255)
          cGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGtt                                                                                                                                       <  1:4517778/150‑1 (MQ=255)
          cGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGtt                                                                                                                                       <  2:2582554/150‑1 (MQ=255)
          cGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGtt                                                                                                                                       <  2:3087428/150‑1 (MQ=255)
           gAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTg                                                                                                                                      >  2:4354245/1‑150 (MQ=255)
             aCCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCAACAGTGCACCTGCACTGATGCt                                                                                                                                    <  1:3264805/150‑1 (MQ=255)
               ccATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTgg                                                                                                                                  >  2:16040/1‑150 (MQ=255)
                 aTACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCg                                                                                                                                >  1:2589393/1‑150 (MQ=255)
                 aTACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCCGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCg                                                                                                                                >  1:5278200/1‑150 (MQ=255)
                  tACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCACGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGa                                                                                                                               >  2:3852373/1‑150 (MQ=255)
                     gCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGc                                                                                                                            <  2:3251797/150‑1 (MQ=255)
                       aTGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTg                                                                                                                          >  1:1945661/1‑150 (MQ=255)
                       aTGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTg                                                                                                                          >  1:5358546/1‑150 (MQ=255)
                             tCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGc                                                                                                                    >  2:4950132/1‑150 (MQ=255)
                              cATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCa                                                                                                                   >  1:619244/1‑150 (MQ=255)
                               aTGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCaa                                                                                                                  >  1:5036219/1‑150 (MQ=255)
                                tGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAAc                                                                                                                 <  2:2009582/150‑1 (MQ=255)
                                 gggTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACg                                                                                                                >  1:937906/1‑150 (MQ=255)
                                   gTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGt                                                                                                              <  1:4573228/150‑1 (MQ=255)
                                    tCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGATCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTg                                                                                                             >  2:1769568/1‑150 (MQ=255)
                                     cACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGa                                                                                                            <  2:4664460/150‑1 (MQ=255)
                                     cACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGa                                                                                                            >  2:399810/1‑150 (MQ=255)
                                        tCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGaaaa                                                                                                         >  1:3154311/1‑150 (MQ=255)
                                          ccGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAc                                                                                                       >  2:5259479/1‑150 (MQ=255)
                                           cGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAcg                                                                                                      >  1:288365/1‑150 (MQ=255)
                                            gggATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAcgc                                                                                                     <  1:347712/150‑1 (MQ=255)
                                            gggATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAcgc                                                                                                     <  2:4808242/150‑1 (MQ=255)
                                             ggATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAAcgcg                                                                                                    <  2:1368716/150‑1 (MQ=255)
                                              gATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCgg                                                                                                   <  1:768937/150‑1 (MQ=255)
                                                 cACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATc                                                                                                <  1:3583523/150‑1 (MQ=255)
                                                   ccGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGt                                                                                              >  1:2382425/1‑150 (MQ=255)
                                                    cGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTg                                                                                             <  2:777130/150‑1 (MQ=255)
                                                      cAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGAc                                                                                           <  2:2387505/150‑1 (MQ=255)
                                                            gCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTg                                                                                     >  2:2175002/1‑150 (MQ=255)
                                                             cACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGc                                                                                    >  1:2091258/1‑150 (MQ=255)
                                                              aCCGCCACCCCGGCTTGCTCCTAGTGCCGTGCATAAGCGACACCCTGGTCTTGATGCGGGTCGCACTCGGCAATCAGCATCTGTTCATGTGCACTGTTGCTGGCGACGCGGCCCAGAAACGGTGAAAAACGCTGATCGTGACTGTCttgc                                                                                   <  2:2855545/150‑4 (MQ=255)
                                                              aCCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGcc                                                                                   <  1:1206066/150‑1 (MQ=255)
                                                              aCCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGcc                                                                                   <  2:2078966/150‑1 (MQ=255)
                                                                 gCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGc                                                                                >  1:5118591/1‑150 (MQ=255)
                                                                      cccGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGt                                                                           >  1:4760944/1‑150 (MQ=255)
                                                                       ccGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTg                                                                          >  1:1574837/1‑150 (MQ=255)
                                                                        cGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGt                                                                                                              <  1:3502049/113‑1 (MQ=255)
                                                                         ggCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGc                                                                        <  2:4320959/150‑1 (MQ=255)
                                                                            ttGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCGGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTa                                                                     <  2:3353315/150‑1 (MQ=255)
                                                                              gCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTAtt                                                                   <  1:616821/150‑1 (MQ=255)
                                                                              gCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTAtt                                                                   >  1:2987025/1‑150 (MQ=255)
                                                                               cTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTg                                                                  <  1:2537265/150‑1 (MQ=255)
                                                                                tCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGc                                                                 >  1:3875907/1‑150 (MQ=255)
                                                                                tCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGc                                                                 >  1:1690349/1‑150 (MQ=255)
                                                                                tCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGc                                                                 <  2:2739946/150‑1 (MQ=255)
                                                                                   aaGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTgg                                                              <  1:344567/150‑1 (MQ=255)
                                                                                   aaGTGCCGTGCATAAGCGACACACTGGTGATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTgg                                                              <  2:563038/150‑1 (MQ=255)
                                                                                    aGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGt                                                             >  2:5450839/1‑150 (MQ=255)
                                                                                     gTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTa                                                            <  1:2322100/150‑1 (MQ=255)
                                                                                      tGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAg                                                           <  1:3680360/150‑1 (MQ=255)
                                                                                        ccGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGaa                                                         <  1:2763500/150‑1 (MQ=255)
                                                                                        ccGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGaa                                                         >  1:5403586/1‑150 (MQ=255)
                                                                                        ccGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCGGCCGGCACCGTGGCGTATTGCTGGTAGaa                                                         <  2:4589570/150‑1 (MQ=255)
                                                                                         cGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAAc                                                        >  2:5172392/1‑150 (MQ=255)
                                                                                            gCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCAc                                                     <  1:3420574/150‑1 (MQ=255)
                                                                                                aaGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCa                                                 >  1:4826625/1‑150 (MQ=255)
                                                                                                aaGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGCGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCa                                                 >  2:5287500/1‑150 (MQ=255)
                                                                                                  gCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAgg                                               >  2:1079159/1‑150 (MQ=255)
                                                                                                  gCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAgg                                               >  1:2437041/1‑150 (MQ=255)
                                                                                                  gCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAgg                                               <  1:2692774/150‑1 (MQ=255)
                                                                                                    gACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGt                                             <  2:1512871/150‑1 (MQ=255)
                                                                                                    gACACCCGGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGCCGCTGCCCAGCAACGGTGAACAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGt                                             <  1:996828/150‑1 (MQ=255)
                                                                                                       acCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTg                                          >  2:4031559/1‑150 (MQ=255)
                                                                                                             gTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTc                                    >  2:5020120/1‑150 (MQ=255)
                                                                                                               cATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCaa                                  <  2:288365/150‑1 (MQ=255)
                                                                                                                    aGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAgg                             >  1:3218971/1‑150 (MQ=255)
                                                                                                                     gCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACTGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGt                            <  2:1811920/150‑1 (MQ=255)
                                                                                                                         gTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAAcc                        >  2:1348532/1‑150 (MQ=255)
                                                                                                                             cACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTc                                    <  2:84107/134‑1 (MQ=255)
                                                                                                                             cACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTc                                    >  1:84107/1‑134 (MQ=255)
                                                                                                                              acccGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGc                   >  1:1037498/4‑150 (MQ=255)
                                                                                                                                tCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCa                 >  1:4787963/1‑150 (MQ=255)
                                                                                                                                tCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCa                 >  1:869631/1‑150 (MQ=255)
                                                                                                                                  ggCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATa               <  1:1308468/150‑1 (MQ=255)
                                                                                                                                  ggCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATa               <  1:5491587/150‑1 (MQ=255)
                                                                                                                                   gCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAg              <  1:5240096/150‑1 (MQ=255)
                                                                                                                                       tCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCt          >  2:318442/1‑150 (MQ=255)
                                                                                                                                       tCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCt          <  1:1143913/150‑1 (MQ=255)
                                                                                                                                       tCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCt          >  2:3548618/1‑150 (MQ=255)
                                                                                                                                       ccAGCAACAGTGCACCTGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCt          >  1:4228137/2‑150 (MQ=255)
                                                                                                                                        cAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTg         <  2:5477381/150‑1 (MQ=255)
                                                                                                                                         aGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGc        <  1:2019754/150‑1 (MQ=255)
                                                                                                                                         aGCAACAGTGCACCTGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTCTGGCTGGTAGAACCACTCCAGGGGCTGCGCTTCAAGCAGGTAACCGCTGCCAGAGCGCTGc        >  2:4745321/1‑150 (MQ=255)
                                                                                                                                         aGCAACAGTGCACCTGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGc        >  1:1677073/1‑150 (MQ=255)
                                                                                                                                          gCAACAGTGCACCTGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCa       >  2:3286399/1‑150 (MQ=255)
                                                                                                                                            aacAGTGCACCTGCACTGATGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCtt                                     >  1:5556399/3‑118 (MQ=255)
                                                                                                                                             tCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCg    >  2:3059/1‑150 (MQ=255)
                                                                                                                                               aGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa  <  2:2214244/150‑1 (MQ=255)
                                                                                                                                               aGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa  <  2:2294588/150‑1 (MQ=255)
                                                                                                                                               aGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa  <  1:3215535/150‑1 (MQ=255)
                                                                                                                                               aGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGaa  <  1:2237850/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
CCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCGCAAGCTGCACCGCCACCCCGGCTTGCTCCAAGTGCCGTGCATAAGCGACACCCTGGTCATGCAGCGGGTCGCACTCGGCAATCAGCATCAGTGCAGGTGCACTGTTGCTGGCGACGCTGCCCAGCAACGGTGAAAAACGCGGATCGTGACGGTCTGCCGGCACCGTGGCGTATTGCTGGTAGAACCACTCCAGGGTCTGCGCTTCAAGCAGGTAACCGCTGCCATAGCGCTGCACCGAA  >  NC_002947/4772902‑4773194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: