| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,847,822 | A→G | 5.2% | H317R (CAC→CGC) ‡ | ccoP‑II → | cbb3‑type cytochrome c oxidase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,847,822 | 0 | A | G | 5.2% | 621.5 / 14.1 | 191 | H317R (CAC→CGC) ‡ | ccoP‑II | cbb3‑type cytochrome c oxidase subunit |
| Reads supporting (aligned to +/- strand): ref base A (44/136); new base G (3/7); total (47/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 196 total aligned reads displayed.
CCACCCGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAA > NC_002947/4847673‑4847971 | acccGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCAcc > 1:4622117/1‑150 (MQ=255) acccGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCAcc > 1:4462167/1‑150 (MQ=255) ccGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAg < 2:923814/150‑1 (MQ=255) cGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAgg < 2:4807183/150‑1 (MQ=255) cAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCt < 1:429902/150‑1 (MQ=255) ggCTTTCATCTACGGCTCGAGCTTTGCCGAGTTGCATCAGACCATTAGTTATTGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGTGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCTgt < 1:80229/150‑2 (MQ=255) ggCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGa < 2:5129379/150‑1 (MQ=255) gCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCTgta < 1:4339525/150‑3 (MQ=255) gTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGcc > 1:1958858/1‑150 (MQ=255) gTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCTgtaga < 1:1686270/150‑5 (MQ=21) tCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCgg < 1:1674615/150‑1 (MQ=255) tCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCgg < 2:3682301/150‑1 (MQ=255) tCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCa > 2:3713464/1‑150 (MQ=255) cTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCaa < 1:2436108/150‑1 (MQ=255) aCGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAgg < 2:89977/150‑1 (MQ=255) ggCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCt < 2:1072792/150‑1 (MQ=255) ggCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCt < 2:3991087/150‑1 (MQ=255) ggCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCt < 1:3713464/150‑1 (MQ=255) ggCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCt < 1:4751832/150‑1 (MQ=255) cTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGa < 1:2245577/150‑1 (MQ=255) cTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGa < 1:5074554/150‑1 (MQ=255) tCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAg > 1:1528566/1‑150 (MQ=255) gAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTa > 2:2576093/1‑150 (MQ=255) aGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTaa < 2:1041639/150‑1 (MQ=255) aGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTaa < 2:4491208/150‑1 (MQ=255) aGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTaa > 2:2074518/1‑150 (MQ=255) tttGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggc > 1:5348397/1‑150 (MQ=255) tttGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggc > 1:2524800/1‑150 (MQ=255) tGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggcag < 1:756597/150‑1 (MQ=255) cccAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggcaggc > 2:391/1‑150 (MQ=255) cccAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggcaggc < 1:1429670/150‑1 (MQ=255) ccAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcc > 2:1855023/1‑150 (MQ=255) cAGTTGCAGCAGTCCATTAGTTATGGCCGCCAGGGGCAGATGCCGGACCAGGAACATCTGCAGGGCATGGACATGGTGCACTTGGTGGCGGCTTAAGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGATGAGTAAGGCAggcct < 1:4536592/150‑1 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 2:4609965/150‑1 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 2:2015891/150‑1 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 1:5478394/150‑1 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 1:3038563/150‑1 (MQ=255) ttGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctggc < 1:2074518/150‑1 (MQ=255) ttGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctggc < 2:3128015/150‑1 (MQ=255) ttGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctggc < 2:5528830/150‑1 (MQ=255) ttGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctggc < 1:1045308/150‑1 (MQ=255) cagcagACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCctc < 1:2004261/150‑1 (MQ=255) cagACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTc > 2:272583/1‑150 (MQ=255) aCCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTcgcg > 2:2245550/1‑150 (MQ=255) cATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCggg > 2:118104/1‑150 (MQ=255) cGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTaaa < 1:953585/150‑1 (MQ=255) cGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTaaa > 2:2578865/1‑150 (MQ=255) gTTATGGCCTCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGAAACGACAAGGTGCACTTGCTGGCGTCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAAc < 2:1467007/150‑1 (MQ=255) ttATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAAcc < 1:3553200/150‑1 (MQ=255) aTGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCg < 1:4795307/150‑1 (MQ=255) tGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGc < 1:3299378/150‑1 (MQ=255) tGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGc < 1:2794532/150‑1 (MQ=255) gccgccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTc < 1:5158691/150‑1 (MQ=255) ccgccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTTTACCCGcgaa < 2:5330933/150‑4 (MQ=255) ccgccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTTTACCCGcgaa < 2:1662329/150‑4 (MQ=255) ccgccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTcc < 2:4199086/150‑1 (MQ=255) gccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTTTACCCGcgaaga < 2:4462167/150‑6 (MQ=255) aGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTacac < 2:5348397/150‑1 (MQ=255) ggggCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTAcaca < 2:2970069/150‑1 (MQ=255) ggggCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCCCTCCTAaaca > 1:3490095/1‑150 (MQ=255) gATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATcc < 2:3847041/150‑1 (MQ=255) gATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCt < 2:678928/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCt‑t < 1:2576093/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCtgt < 2:795331/150‑3 (MQ=255) gCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCtgtg < 2:1056611/150‑4 (MQ=255) ggCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAg < 2:4432874/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGa < 2:3291184/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGa < 2:1108091/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGa < 1:423396/150‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTacac < 2:1645346/134‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACCCAGGATCCT‑TGgaggag > 2:1911723/1‑150 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAg < 2:3307626/150‑1 (MQ=255) cAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGc < 1:1826117/150‑1 (MQ=255) cAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCCCTCCAACACAGGATCCG‑TGTAGGAGc > 1:695918/1‑150 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:3958773/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:3837343/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:2691616/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCgg < 2:1389885/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCgg < 2:1390454/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCggg < 2:3405330/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCggg < 2:593166/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCggg < 1:3122076/150‑1 (MQ=255) aacaacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGt < 1:2160470/150‑1 (MQ=255) aacaacGGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCGTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTACGGCAGGCCTGGCCTCCTCGCGGGTACACCCGCTCCTACCCAGGATCCT‑GGTAGGAGCGGGt < 2:1238402/150‑1 (MQ=255) aacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTa < 1:1084043/150‑1 (MQ=255) aacTGCAGGGCAACGACAAGGTGCACTTGCAGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAAACCGCACCAACACAAGAAACA‑AGTAGGAGCCGGTTTa > 1:5015574/1‑150 (MQ=255) aGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTAGCGGGGTAAAACGCGCCTACACAGGTTGCG‑TGTTTGAGGGGGTTTAACcgcg > 1:605801/1‑150 (MQ=255) aaCGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAagag > 2:4137522/1‑150 (MQ=255) aaCGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑GGTAGGAGCGGGTTTACCCGCGAagag > 2:3171635/1‑150 (MQ=255) aCAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAg > 2:4552865/1‑113 (MQ=255) aCAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAg < 1:4552865/113‑1 (MQ=255) gtGGCGGCTTACGTCTACCGCCTGTCGCACCTGGCTGAGCCGGCCAAGGCTGCGTACGGCCGGCCTGGCATCTGCGCGGGTAAACCCGCTCCTACACCGGATCCT‑GGTAGGTGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCa < 2:5015574/149‑1 (MQ=37) tGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTACTGGCACAGCAt > 2:2505155/1‑150 (MQ=255) tGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAAACCGCTCCGACACAGGATACG‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCAt > 2:2504864/1‑150 (MQ=255) cTACTGCGTGTCGCACCCGGCTGAGCCGGCCACGGCTGTGTACGGCCGGCCGGGCCTCTTCGGGGGAAACCCCGCTCCTACACTGTATCCT‑TGTCGGCGGGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCaa < 1:4137522/150‑1 (MQ=25) ctcAGCCTGGTGCGACAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTTAAACCGCTCCGACCCACGATACG‑TGTGGGAGCGGGTTTACCCGCGAAGAGGGCGGTGCTGGGACAGCATTTATCGCAGGCCAg > 1:4020143/3‑150 (MQ=25) tcAGCCTGGTGCGACAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTTAAACCGCTCCTAAACAGGATGCT‑TGTTGGTGCGGGTTTTACCGCGAAGAGGGCGGTACTGGGACAGCCTTTATAGCAGGGAAGt > 1:1257245/2‑150 (MQ=255) tcAGCCTGGTGCGACAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGGAAAACCCCTCCGACACAGGAAACA‑GGTTGGTGCGGGTTTAACCCCCCACAGGCCCGTAAAGGCACACCAATTCTCCCACGCAAGt > 1:3859227/2‑150 (MQ=255) aCCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCG‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCaa > 1:1847085/1‑150 (MQ=255) aCCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCAACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCaa > 2:3963758/1‑150 (MQ=255) | CCACCCGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAA > NC_002947/4847673‑4847971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |