| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,891,169 | G→C | 9.4% | intergenic (+54/+69) | PP_4295 → / ← PP_4296 | TetR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,891,169 | 0 | G | C | 9.4% | 528.0 / 32.0 | 168 | intergenic (+54/+69) | PP_4295/PP_4296 | TetR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (74/78); new base C (5/11); total (79/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 168 total aligned reads displayed.
CCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACG > NC_002947/4891021‑4891317 | aGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAg < 1:4431761/150‑1 (MQ=255) ggCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAgg < 2:3341969/150‑1 (MQ=255) gCCAAGCTGGCAGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGGATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACAATCTCGAAGGGACATTCGCGGGCAAGCCCGCTCCACCAGCATCACCAAATGCCTCACGGt > 2:2938353/1‑150 (MQ=255) ccAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGtt < 2:3872950/150‑1 (MQ=255) ccAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGtt > 2:370295/1‑150 (MQ=255) caGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGCATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCAACTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgt < 2:1601790/149‑1 (MQ=255) aaGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgt < 1:4281539/150‑1 (MQ=255) aaGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgt < 2:4320819/150‑1 (MQ=255) aaGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgt > 2:3929935/1‑150 (MQ=255) aGCTGGCCGACAGTGTTTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGATTGGTTGTGAGCCTGAGGCAGCCTGAAGCATCTCGTAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCACATGCGTGAAGGTtgtg < 2:3824035/150‑1 (MQ=255) aGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgtg < 2:4657739/150‑1 (MQ=255) aGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgtg < 2:4593385/150‑1 (MQ=255) aGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgtg < 2:3328018/150‑1 (MQ=255) aGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgtg < 2:1666174/150‑1 (MQ=255) gCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCGGAAGGTTGTgg > 1:390561/1‑150 (MQ=255) cTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGa < 1:5441252/150‑1 (MQ=255) cTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGa < 1:508638/150‑1 (MQ=255) tGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAg < 1:4613534/150‑1 (MQ=255) gCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTc > 2:4629592/1‑150 (MQ=255) ccGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTcc < 1:69400/150‑1 (MQ=255) cGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTcc > 1:3584271/1‑149 (MQ=255) aGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCtgtg < 1:221975/150‑1 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTgg < 2:5104069/150‑1 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCACTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTgg < 2:918417/150‑1 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCAGTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTgg < 2:4321479/150‑1 (MQ=255) tGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACCTGCCTGAAGGTTGTGGAGTCCCTGTggg > 2:5007229/1‑150 (MQ=255) tGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCGGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGACGGTTGTGGAGTCCCTGgggg > 2:5220624/1‑150 (MQ=255) aTTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAg < 2:586635/150‑1 (MQ=18) ttATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGc < 1:1494836/150‑1 (MQ=18) ttATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgtg > 1:4227205/1‑134 (MQ=255) ttATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTtgtg < 2:4227205/134‑1 (MQ=255) ttATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGc < 2:2320382/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCgg < 1:3763251/150‑1 (MQ=18) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCgg < 1:1662651/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGGTGTGGAGTCCCTGTGGGAGCgg > 2:5260095/1‑150 (MQ=255) aTGACGCGGCGGCCGAGAACATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCgg < 1:2940701/150‑1 (MQ=18) gACGCGGCTGCCGAGACCATAATTAGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCTAATGGCCATTCGCTGGCAAGCCCTCTCCCACAGGATCAACACATGCCTGAAGGTTTTGGAGTCCCTGTGGGAGCGGGc < 2:1735419/150‑1 (MQ=255) ggcggcCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGcc < 2:3813785/150‑1 (MQ=255) ggcCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCcgc < 2:133574/150‑1 (MQ=255) gagaCCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCgg > 2:4161471/1‑136 (MQ=17) gagaCCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCgg < 1:4161471/136‑1 (MQ=17) gagaCCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAAt > 2:3016717/1‑150 (MQ=255) ccATCATTCGTCTGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGc < 2:4157397/150‑1 (MQ=255) catcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGcc > 1:4487245/1‑150 (MQ=255) atcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATGTCGATGGGCCATTCGCGGGCAAGCCCGGTCCCACAGGATCAACACATGCCTGAAGGTTGTGGAGTCCGTGTGGGAGCGGGCTTGCCCGCGAATGGGGCa > 2:2899392/1‑150 (MQ=39) tcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGTAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAg > 2:1398077/1‑150 (MQ=255) cGTATGGTCTTGAAAGGTGGTGAGCCTGAGGCAGCCTGAACCACCTCGAAGGGCCATTCGCGGGCACGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAg < 2:3538131/150‑1 (MQ=255) tGGTCTTGAAAGGTTGTGTGCCTGAGGCAGCCTGAACCATCTCTAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCCCTTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGGTTGCCCGCGAATGGGCCAGAACAGGCaa < 2:1965184/150‑1 (MQ=39) gTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATa < 2:3148952/150‑1 (MQ=255) aaaGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGAtt > 1:1327723/1‑150 (MQ=255) aaaGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGAtt > 2:5557344/1‑150 (MQ=255) aGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTa < 1:5601818/150‑1 (MQ=255) tggtgCGCCTGCGGCAGCCTGAACCATCTCGACGGGCCATGCGCGGGCACGCCCGCGCCCCCCGGATCCCCACCTGCCTGACGGGTGTGGCGTCCCTGTGGGAGCGGGCTGGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGc < 2:1135695/148‑1 (MQ=255) gAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACAAGCCTGAAGGTTGTGGAGTCCCTATGGGAGCGGGCTTTCCCGCGAAAGGGCCAGAACACGCAATAGAGATTTAGGCCGcg > 1:4813710/1‑149 (MQ=39) gCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCa > 2:2105995/1‑150 (MQ=255) tGACCCCTCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACCGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGcc < 2:5027479/150‑1 (MQ=255) aaCCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCg > 2:4379302/1‑150 (MQ=255) tctcGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCCCCACATGCCTGTAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACCGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGcc > 2:3589163/1‑150 (MQ=255) ccGACGGGCCTTGCGCGGGCACGCCCGCCCCCACAGGACCCCCACAGCCCTGACGGTGGTGGCGCCCCGGTGGGCGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGcccc < 1:5260095/149‑1 (MQ=255) ggCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCAGTGGGAGCGGGCTTGCCCGCGAATGGGCCCGAACAGGCACTAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCaccacc > 2:5247612/1‑150 (MQ=255) ccATTCGCGGGCAAGCCCGCTCCCACAGGGACGACACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACctcctc > 2:3785388/1‑150 (MQ=17) aTTCGCGGGCAAGCCCGCTCCCACAGGATCACCACAAGCCAGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACACGCAATAGAGATTTAGGCCGCAACCCCCGCATCTGCCCGCAGCCCCaccaccacca > 1:4426383/1‑146 (MQ=38) gggCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAAAAGAGAATTATGCCGCTACCCCGGCATCTGACCGCAGCCCCACCTCCACGATCGCAc > 1:4504149/1‑150 (MQ=39) cAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGa < 2:1313308/150‑1 (MQ=255) aaGCCCGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGAt > 2:4036908/1‑150 (MQ=18) aGCCCGCTCCCCCTGGATCACCACAGGCCTGATGGTTGTGGTGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATc < 2:4698736/150‑1 (MQ=255) aGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATc < 2:4674747/150‑1 (MQ=255) aGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATc < 1:3679941/150‑1 (MQ=255) gCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCg > 1:3395685/1‑150 (MQ=255) cccGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGc > 1:1313007/1‑150 (MQ=255) cccGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGc > 1:1833223/1‑150 (MQ=255) ccGCTCCCACAGGGACTCCACAACCTTCAGGCATGTGGTGATCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGca > 1:2766609/1‑150 (MQ=18) ccGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGca > 1:5556559/1‑150 (MQ=255) ccGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGca > 1:331340/1‑150 (MQ=255) tCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACt > 1:4852984/1‑150 (MQ=255) ccACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGc > 2:3727829/1‑150 (MQ=255) cacaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCt > 1:1217515/1‑150 (MQ=255) cacaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCt > 1:5317852/1‑150 (MQ=255) acaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtc > 1:1035668/1‑150 (MQ=255) acaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtc > 2:3272633/1‑150 (MQ=255) acaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtc > 2:3273153/1‑150 (MQ=255) ccggATCACCACCTGCCGGACGGTTGGGGCGTCCCTGTGGGCGGGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtcg < 1:5368190/148‑1 (MQ=255) aGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtcgt > 1:2852353/1‑150 (MQ=255) gATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCTCACTGCtcgtcg > 2:4864851/1‑150 (MQ=255) gATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtcgtcg > 1:4307196/1‑150 (MQ=255) gATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtcgtcg > 2:5464207/1‑150 (MQ=255) aTCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGa > 2:3825092/1‑150 (MQ=255) tCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGat > 1:4335102/1‑150 (MQ=255) ccacATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATc > 2:2615223/1‑150 (MQ=255) cacaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATcc > 1:2527918/1‑150 (MQ=255) cacaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATcc > 1:837815/1‑150 (MQ=255) cacaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATcc < 2:390561/150‑1 (MQ=255) cacaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATcc > 1:1755346/1‑150 (MQ=255) acaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCg > 2:3084485/1‑150 (MQ=255) caTGCCTGACGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGa < 1:2691196/150‑1 (MQ=255) caTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGa < 1:2691187/150‑1 (MQ=255) caTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGa > 1:3051987/1‑150 (MQ=255) aTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGAc > 1:2234086/1‑150 (MQ=255) aTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGAc > 2:2862879/1‑150 (MQ=255) tGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACg > 1:1944197/1‑150 (MQ=255) | CCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACG > NC_002947/4891021‑4891317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |